Pairwise Alignments

Query, 156 a.a., N utilization substance protein B from Vibrio cholerae E7946 ATCC 55056

Subject, 134 a.a., transcription antitermination protein NusB (RefSeq) from Shewanella sp. ANA-3

 Score =  139 bits (351), Expect = 1e-38
 Identities = 70/143 (48%), Positives = 95/143 (66%), Gaps = 14/143 (9%)

Query: 5   VKPAARRNARQFALQAIYSWQITKENVATIEEQFLTSGKYDEEEHRAAEPALAAPETDVS 64
           +KP+ RR AR+ A+QAIYSWQ++  N+A +E +FLT    D                DV+
Sbjct: 1   MKPSERRKARRLAVQAIYSWQLSGNNIADVEHEFLTEQSLDG--------------VDVA 46

Query: 65  YFRDLLAGVVLNHNELDSKLRPFVSRPMQDLDMMELALLRLAMYEMTRREDVPYKVVINE 124
           YFR+L AGV     +LD    P + RP+ ++  +E A++RLA YE+T R+DVP+KV INE
Sbjct: 47  YFRELFAGVATKKTQLDELFIPHLDRPIDEVSPVEKAIVRLAAYELTFRKDVPFKVAINE 106

Query: 125 AIELAKVFAAEDSHKFVNGVLDK 147
           AIELAK F A++SHKFVNG+LDK
Sbjct: 107 AIELAKAFGADESHKFVNGLLDK 129