Pairwise Alignments

Query, 334 a.a., thiamine-phosphate kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 336 a.a., hydrogenase expression/formation protein HypE (RefSeq) from Shewanella loihica PV-4

 Score = 47.0 bits (110), Expect = 7e-10
 Identities = 58/230 (25%), Positives = 102/230 (44%), Gaps = 22/230 (9%)

Query: 34  LALGDDCAIVKVPENSRVAISTDTLVAGTHFLAQANPAWVAHKALASNISDLAAMGATPA 93
           LA  +D A++      + A +TD+      F A  N   +   A+A  ++DLA MGA P 
Sbjct: 36  LASEEDAALLHF--EGQAAFTTDSFTVSPLFFAGGN---IGKLAIAGTVNDLAMMGAEPQ 90

Query: 94  WVSLALTLPE---IDDAWLTPFCDAFFELAKYYNVQLIGGDTTKGP------LSITLTVQ 144
           ++S +  + E   I D  L     +  E       +++ GDT   P      L I  +  
Sbjct: 91  YLSCSFIIEEGFAIKD--LKAIVGSMAEELHKSGTRIVCGDTKVVPKGCADGLFINTSGV 148

Query: 145 GFLPKEQAMLRSGAKVGDWLYVTGDLGDSQAGLDVILDPEKRHLPFADILEQRH-YLSTP 203
           G + K Q  +++  + GD + V+GD+G  + G  +++  E   L    + +  + +    
Sbjct: 149 GRVLKPQISVKN-LRPGDAILVSGDIG--RHGAAILMAREGLTLESELVSDCANLWPVVE 205

Query: 204 RIVAGQALVHLASSAIDISDGLIADLQHILRRSNVGASIDVSLLPLSKEL 253
           +++A    VH    A     GL A L      SNVG +++ S +P+  E+
Sbjct: 206 QLIACNIEVHAMRDA--TRGGLAAVLNEWAGASNVGINVEESKIPVCDEV 253