Pairwise Alignments

Query, 881 a.a., bifunctional uridylyltransferase/uridylyl-removing protein GlnD from Vibrio cholerae E7946 ATCC 55056

Subject, 861 a.a., protein-P-II uridylyltransferase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  825 bits (2132), Expect = 0.0
 Identities = 425/853 (49%), Positives = 569/853 (66%), Gaps = 6/853 (0%)

Query: 25  KQQLESFTEYQKQEFFDHHPVTDLVLGRSEYMDLLLHRLWQFFGFDELVEVSLVAVGGYG 84
           KQ L    +     F    P+ +LV  R +++D L+ + WQ  G D+   ++L+AVGGYG
Sbjct: 8   KQSLIEQNQTLLARFKAKTPIEELVTQRCQFVDSLVKQAWQQHGLDQY-PIALIAVGGYG 66

Query: 85  RGELHPLSDIDLLVLSQQPLSEQVANKISQFLTLLWDLKLEIGHAVRTVEQCAEIGKADL 144
           RGELHP SD+DLL L +  LS+     +S+F+  LWD  LEIGH+VRT++    +G+ D+
Sbjct: 67  RGELHPHSDVDLLFLFEGELSKAAETTLSEFIAFLWDANLEIGHSVRTLDDTLRLGRDDI 126

Query: 145 TVATNLQEARLLCGCEETFHRLKMVIHSESFWPSEIFYQAKVREQKERHARYHDTTYNLE 204
           T+ATNL EARLL G E  F +L   I    FW S  F+ AK  EQ  RHA+   + ++LE
Sbjct: 127 TIATNLLEARLLTGPETLFDQLYDAIRQSDFWTSSNFFIAKRDEQTARHAKA--SAFDLE 184

Query: 205 PDIKSTPGGLRDIHTLSWVARRHFGATSLYEMSRFGFLTDAEYRELVECQDFLWRVRFAL 264
           P+IKS PGGLRDI T++WVA RHFGA+ L E+  + FL  AE  EL+ECQ FLW++RFAL
Sbjct: 185 PNIKSCPGGLRDIQTIAWVAMRHFGASRLEELVEYEFLEPAELEELLECQHFLWKLRFAL 244

Query: 265 HIELKRYDNRLTFAHQVQVARHLGYFGEGNRGIEMMMKEFFRTLRRVAELNKMLLKIFDK 324
           H+ + R +NRL F  Q QVA  +GY       +E MMK ++RT+RRV ELN+MLL++F +
Sbjct: 245 HMAVGRDENRLLFDVQRQVAELMGYEDATQLAVEQMMKRYYRTVRRVMELNEMLLQLFKR 304

Query: 325 AILNNGEEAEAVIIDDDFQRRGNMIEARKPALFQARPETILDMFLHMASDSTIESVAPAT 384
           A L + +  E   IDD++QRRG  IEA    LF +  E I+ +F+H+A +S I+ +   T
Sbjct: 305 ATLGHTKALEIQAIDDNYQRRGAFIEALSDDLFDSGEE-IVRLFVHIAKNSNIKGIYAPT 363

Query: 385 MRQLRTARRRLNKFLHTLPAAREKFIELVRHPNALHKAFSQMHKLGVLAAYLPQWNQIVG 444
           +R LR ARR   + L   P  R+ F+E+++HP  +  A S MHK GVL+AYLP W  I G
Sbjct: 364 LRSLRRARRAQLQPLQENPLCRQAFMEILKHPRGI-AALSLMHKHGVLSAYLPAWRNIEG 422

Query: 445 QMQFDLFHVYTVDEHSIRLLKHIHLFSDANNHDRHPICCEIYPKIQKKELLILAAIFHDI 504
           QMQFDLFH YTVDEH+ RLL +I  FS     +  P+   +  ++ KK LL+L AIFHDI
Sbjct: 423 QMQFDLFHAYTVDEHTHRLLLNIERFSQPEQKEEFPLGSVLINQLPKKGLLVLGAIFHDI 482

Query: 505 GKGRGGDHSEIGADEAFDFCIEHGLSKPEAKLVAWLVKNHLLMSVTAQRRDIYDPDVIIE 564
            KGRGGDHS++G+ +A  FC  HGL+  + +LVAWLV+NHL+MSVTAQRRDI DPDV+ +
Sbjct: 483 AKGRGGDHSKLGSSDALAFCKLHGLNDHDGRLVAWLVENHLVMSVTAQRRDISDPDVVAD 542

Query: 565 FAKKVRDEERLEYLVCLTVADICATNPELWNSWKRTLLAELFYSTQRALRRGLENPVDVR 624
           FA KVRD   L YL CLTVADICATN + WN+WK +LL +L++STQR L RG E PVD+R
Sbjct: 543 FASKVRDAVHLSYLYCLTVADICATNEKTWNNWKGSLLRDLYFSTQRVLARGKEKPVDIR 602

Query: 625 ERIRHNQQMASALLRKEGFSSREIEVLWQRFKADYFLRHTHKQIAWHCTHLLRHEDSSKP 684
            R+R  Q  A   L + G   ++++ LWQRFKADYFLRH   Q+AWH   +L+H+   +P
Sbjct: 603 ARVREYQAKAKKELLRRGIKEKDLDTLWQRFKADYFLRHQPNQVAWHAEAILKHKQVDEP 662

Query: 685 LVLLSKKATRGGTEVFIYTKDQAALFATVVAELDRRNLNVHDAQIMASKDGYVLDTFMVL 744
           LVL+SK  TRGGTE+F+Y +D+  LFATV+A LD +N+NVHDA IM SKD Y LDTF++L
Sbjct: 663 LVLVSKHTTRGGTELFVYCQDRPKLFATVMAVLDNKNINVHDANIMTSKDNYALDTFVIL 722

Query: 745 DQNGQAIEE-DRHQALIRHLVHVLEDGRPTTQKARRIPRNLQHFKVKTQVDFLPTKSKKR 803
           +Q+G+ + +  R Q++ + L   L    P   + R++ R ++ F V TQV FL +     
Sbjct: 723 EQDGEPVSQLSRIQSIRKALEKALASDNPKLPRFRKLSRKMKPFNVPTQVSFLESNRHGT 782

Query: 804 TLMEFVALDTPGLLATVGATFAELNLDLHAAKITTIGERAEDLFILTNAQGTRLNEEEEQ 863
           ++ME +ALDTPGLLA VG  F   N  L +AKITTIGERAED FIL    G +LNE +E 
Sbjct: 783 SMMELIALDTPGLLAKVGDIFYRCNTTLLSAKITTIGERAEDFFILQTNDGLQLNETQEH 842

Query: 864 HLREKLIEHVAEL 876
            L+E LI  ++ +
Sbjct: 843 TLKEALISALSAI 855