Pairwise Alignments

Query, 881 a.a., bifunctional uridylyltransferase/uridylyl-removing protein GlnD from Vibrio cholerae E7946 ATCC 55056

Subject, 608 a.a., [protein-PII] uridylyltransferase from Bifidobacterium breve UCC2003

 Score =  100 bits (249), Expect = 3e-25
 Identities = 136/578 (23%), Positives = 230/578 (39%), Gaps = 71/578 (12%)

Query: 75  VSLVAVGGYGRGELHPLSDIDLLVLSQ-QPLSEQVANKISQFLTL-LWDLKLEIGHAVRT 132
           +   +VG   RG+L P SD+DL+++ + + L++Q  N+++  L   LWD  L++ H++RT
Sbjct: 62  IGFASVGSLARGQLGPSSDLDLVIIYEPRALNDQQLNELANKLWYPLWDSGLDLDHSIRT 121

Query: 133 VEQCAEIGKADLTVATNLQEARLLCGCEETFHRLKMVIHSESFWPSEIFYQAKVREQKER 192
             QC E+   DL  A    + + + G  E        I       +       +   K R
Sbjct: 122 RAQCEEVTDHDLPAAMGWLDVKPIAGDTELIQTTATSILERWRKAARKRLPELLDSAKSR 181

Query: 193 HARYHDTTYNLEPDIKSTPGGLRDIHTLSWVARRHFGATSLYEMSRFGFLTDAEYRELVE 252
              +    Y  +PDIK   GGLRD   +S +A                +L D  +    E
Sbjct: 182 LDEFGRLQYINQPDIKEARGGLRDSVLVSALAA--------------SWLADRPHGIYDE 227

Query: 253 CQDFLWRVRFALHIELKRYDNRLTFAHQVQVARHLGY----FGEGNR---GIEMMMKEFF 305
             + L  VR  +H+   +  N L   +Q +VA  LG     + E  R    I+ +     
Sbjct: 228 AVERLLDVRDCIHLAAGKDTNLLLTPYQAKVAAMLGLADPTWPENERAAYSIDDLQTLLA 287

Query: 306 RTLRRVAELNKMLLKIFDKAILNNGEEAEAVIIDDDFQRRGNMIEARK-----PALFQAR 360
           R  RR++          + ++ +  E+          QR G   EA +     P + +  
Sbjct: 288 RIGRRISFSLDSTASRAEHSLTH--EKPRFAFFQMFSQRAGGRREAPQFDVVAPGVAKHE 345

Query: 361 PETILDMFLHMASDSTIE------------SVAPATMRQLRTARRRLNKFLHTLPAAREK 408
            E +L   +  A + T+              + P+T+  L+      N++      +RE 
Sbjct: 346 GELVLAPGVDPAKNPTLALRAAVASGEFGLPINPSTLVNLKNCPIHDNQW---DDESREL 402

Query: 409 FIELVRHPNALHKAFSQMHKLGVLAAYLPQWNQIVGQMQFDLFHVYTVDEHSIRLLKHI- 467
           F+ L+     L   +  +  + +   ++P+W  I  +    + H YT+D H + +   + 
Sbjct: 403 FVRLLACGPELLDVWESIDFVDIPGRWMPEWLGIRNRPSASVAHRYTIDRHMVEVASRLT 462

Query: 468 -HLFSDANNHDRHPICCEIYPKIQKKELLILAAIFHDIGK-GRGGDHSEIGADEAFDFCI 525
               S     D H             + L+LA I HDIGK     DH+  GA        
Sbjct: 463 RETPSGGRYDDDH------------FKALLLAGITHDIGKRAFVRDHAAEGARHVPVILK 510

Query: 526 EHGLSKPEAKLVAWLVKNHLLMSVTAQRRDIYDPDVIIEFAKKVRDEE-RLEYLVCLTVA 584
             G +      V  LV+ HL +S  A  +D  DP V  E A ++   +  L+ L  LT A
Sbjct: 511 RMGYASEIIDWVTVLVREHLTLSEYATGKDPNDPAVAEELADRLHHNKLLLDMLFDLTRA 570

Query: 585 D---ICATNPEL------WNSWKRTLLAELFYSTQRAL 613
           D   + AT  E       W+ W+  ++  + Y+  RA+
Sbjct: 571 DGSSLGATAGESITKQYGWSKWREQIVHGM-YAAVRAV 607