Pairwise Alignments

Query, 242 a.a., 30S ribosomal protein S2 from Vibrio cholerae E7946 ATCC 55056

Subject, 251 a.a., 30S ribosomal protein S2 from Synechococcus elongatus PCC 7942

 Score =  226 bits (576), Expect = 3e-64
 Identities = 119/242 (49%), Positives = 157/242 (64%), Gaps = 1/242 (0%)

Query: 1   MASVSMRDMLTAGVHFGHQTRYWNPKMKQFIFGARNRVHIINLEKTVPMFNEALAELAKV 60
           MA +S+ +M+ +GVHFGHQTR WNP+M  +I+ ARN VHII+L KT      A   +   
Sbjct: 1   MAIISLAEMMESGVHFGHQTRRWNPRMAPYIYTARNGVHIIDLVKTAQCVETAYRWVRTN 60

Query: 61  GEKKGKVLFVGTKRAASESVKEAALASNQYYVNNRWLGGMLTNWKTVRQSIKRLKELEVQ 120
            E+  + LFVGTKR A+  + E A     YY+N RWLGGMLTNW T++  + RLKELE  
Sbjct: 61  AEQGKRFLFVGTKRQAAGIIAEEATRCGSYYINQRWLGGMLTNWATIKGRVDRLKELERM 120

Query: 121 STDGTFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 180
              G      KKEA +  RE+E+L+K LGGIK+M  LPDA+ +ID   E+ A++E   LG
Sbjct: 121 EETGALALRPKKEAAVLRRELERLQKYLGGIKNMRRLPDAVVIIDQKREYNAVQECQKLG 180

Query: 181 IPVFAVVDTNSSPDGVDYIIPGNDDAIRAVQLYLNAAAQAINEGRNKDVAAVAEKDGFVE 240
           IP+ A++DTN  PD VD  IPGNDDAIR+V+L ++  A AI E R+   A VAE+  +  
Sbjct: 181 IPIVAMLDTNCDPDVVDVPIPGNDDAIRSVKLIVSKLADAIYEARH-GAAPVAEEYDYDG 239

Query: 241 AE 242
           AE
Sbjct: 240 AE 241