Pairwise Alignments

Query, 242 a.a., 30S ribosomal protein S2 from Vibrio cholerae E7946 ATCC 55056

Subject, 331 a.a., 30S ribosomal protein S2 from Rhodopseudomonas palustris CGA009

 Score =  257 bits (657), Expect = 2e-73
 Identities = 127/237 (53%), Positives = 167/237 (70%), Gaps = 7/237 (2%)

Query: 5   SMRDMLTAGVHFGHQTRYWNPKMKQFIFGARNRVHIINLEKTVPMFNEALAELAKVGEKK 64
           SMR +L AGVHFGHQ+  WNPKM  +IFG RN +HI++L +TVP+ + AL  ++    K 
Sbjct: 7   SMRQLLEAGVHFGHQSHRWNPKMADYIFGVRNNIHIVDLTQTVPLLHRALQAISDTVAKG 66

Query: 65  GKVLFVGTKRAASESVKEAALASNQYYVNNRWLGGMLTNWKTVRQSIKRLKELEVQSTDG 124
           G+VLFVGTKR A ++V +AA  S QY+VN+RWLGG LTNWKT+  SI+RL+ LE   +  
Sbjct: 67  GRVLFVGTKRQAQDAVADAAKRSAQYFVNSRWLGGTLTNWKTISGSIRRLRHLEDVLSSA 126

Query: 125 TFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVF 184
             +  TKKE L   RE +KL +SLGGIKDMGGLPD +FVID + E IAI+EA  LGIPV 
Sbjct: 127 DANAYTKKERLELQRERDKLNRSLGGIKDMGGLPDLIFVIDTNKEDIAIQEAQRLGIPVA 186

Query: 185 AVVDTNSSPDGVDYIIPGNDDAIRAVQLYLNAAAQAINEGRNK-------DVAAVAE 234
           A+VDTN  P G+ Y++PGNDDA RA+ LY +  A+A+ +G ++       D+ A A+
Sbjct: 187 AIVDTNCDPKGITYLVPGNDDAGRAIALYCDLVARAVIDGISRAQGDVGIDIGAAAQ 243