Pairwise Alignments

Query, 242 a.a., 30S ribosomal protein S2 from Vibrio cholerae E7946 ATCC 55056

Subject, 242 a.a., 30S ribosomal protein S2 (RefSeq) from Shewanella loihica PV-4

 Score =  398 bits (1022), Expect = e-116
 Identities = 194/242 (80%), Positives = 217/242 (89%)

Query: 1   MASVSMRDMLTAGVHFGHQTRYWNPKMKQFIFGARNRVHIINLEKTVPMFNEALAELAKV 60
           M +VSMRDML AGVHFGHQTRYWNPKMK FIFGARN VHIINLE TVPMFNEALA ++ V
Sbjct: 1   MTTVSMRDMLQAGVHFGHQTRYWNPKMKPFIFGARNGVHIINLEHTVPMFNEALAFISNV 60

Query: 61  GEKKGKVLFVGTKRAASESVKEAALASNQYYVNNRWLGGMLTNWKTVRQSIKRLKELEVQ 120
             KKGKVLFVGTKRAASE++KEAA++ +QYYV+NRWLGGMLTNWKTVRQSIKRLK+LE Q
Sbjct: 61  ASKKGKVLFVGTKRAASEAIKEAAISCDQYYVDNRWLGGMLTNWKTVRQSIKRLKDLESQ 120

Query: 121 STDGTFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG 180
           S DGTFDKLTKKEALMRTRE+EKLEKSLGGIK+MGGLPD +FVI ADHEHIAIKEANNLG
Sbjct: 121 SVDGTFDKLTKKEALMRTRELEKLEKSLGGIKNMGGLPDVIFVIGADHEHIAIKEANNLG 180

Query: 181 IPVFAVVDTNSSPDGVDYIIPGNDDAIRAVQLYLNAAAQAINEGRNKDVAAVAEKDGFVE 240
           IPV AVVDTNSSPDG++YI+PGNDDA+RA++LY  + A A   GR +D+A  AE+DGFVE
Sbjct: 181 IPVVAVVDTNSSPDGINYIVPGNDDAMRAIRLYAESVAAAAKAGRGQDLAVQAEQDGFVE 240

Query: 241 AE 242
           AE
Sbjct: 241 AE 242