Pairwise Alignments

Query, 242 a.a., 30S ribosomal protein S2 from Vibrio cholerae E7946 ATCC 55056

Subject, 259 a.a., ribosomal protein S2 (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  259 bits (662), Expect = 4e-74
 Identities = 129/236 (54%), Positives = 169/236 (71%), Gaps = 1/236 (0%)

Query: 5   SMRDMLTAGVHFGHQTRYWNPKMKQFIFGARNRVHIINLEKTVPMFNEALAELAKVGEKK 64
           ++R +L AGVHFGHQT+ WNP+M  +I+G RN +HI++L +TVPM ++AL  +     K 
Sbjct: 7   NIRQLLEAGVHFGHQTQRWNPRMAPYIYGDRNGIHIMDLTQTVPMLDQALQAVRDTVAKG 66

Query: 65  GKVLFVGTKRAASESVKEAALASNQYYVNNRWLGGMLTNWKTVRQSIKRLKELEVQSTDG 124
           G+VLFVGTKR A + + EAA    QYY+N+RWLGG LTNWKTV  SI RLK ++ ++ +G
Sbjct: 67  GRVLFVGTKRQAQKPIAEAAERCAQYYMNHRWLGGTLTNWKTVSNSIGRLKSID-EAMEG 125

Query: 125 TFDKLTKKEALMRTREMEKLEKSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLGIPVF 184
            F+ LTKKE L   R+  KL+ SLGGI++MGG+PD +FVID   E +AI EAN LGIPV 
Sbjct: 126 GFEGLTKKERLGMERDQGKLQASLGGIREMGGVPDLIFVIDVKKEDLAIAEANKLGIPVV 185

Query: 185 AVVDTNSSPDGVDYIIPGNDDAIRAVQLYLNAAAQAINEGRNKDVAAVAEKDGFVE 240
           AVVDTN SPDGVDY+IPGNDDA RA+ LY +  A+A  +G +  + A     G +E
Sbjct: 186 AVVDTNCSPDGVDYVIPGNDDAARAIALYCDLVARAALDGMSAQLGAAGVDLGALE 241