Pairwise Alignments

Query, 256 a.a., di-trans,poly-cis-decaprenylcistransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 264 a.a., polyprenyl diphosphate synthase from Methanococcus maripaludis S2

 Score =  173 bits (439), Expect = 3e-48
 Identities = 93/231 (40%), Positives = 139/231 (60%), Gaps = 4/231 (1%)

Query: 18  PKHIAVIMDGNGRWAKAQGKPRVFGHKNGVAAVRKTISTSARLGIKAVTLFAFSSENWRR 77
           PKH+ +IMDGN R AK  G+    GH  G + V + I     L I  +TL+AFS EN+ R
Sbjct: 33  PKHVGIIMDGNRRLAKKLGENPELGHNLGASKVHEVIDWCVSLKIPTITLYAFSLENFNR 92

Query: 78  PEEEVGVLMELFMT--VLSTEIKKLHKNNLRLRVIGDKSRFSERLQTKIAQAEQLTASNT 135
           PE+EV VLM+LF    +   +   +HK+ +R+ VIG +    E +Q  I  AE  T   +
Sbjct: 93  PEKEVKVLMDLFEREFIEIADHPDVHKDKIRVSVIGRREMLPEYVQKAINYAEDKTKGYS 152

Query: 136 GMVVNIAANYGGQWDILQATQALAEKVTQGELQPSDIDEDVFKQHLTMADL--PDVDLLI 193
              VN A  YGGQ +I+ + + +A++V  GE+   DI+ ++  ++L  ++L  P+ DL+I
Sbjct: 153 DYFVNFAIAYGGQQEIIDSVKKIAKQVKNGEIDIEDINIELISKNLYTSNLPSPNPDLII 212

Query: 194 RTSGECRISNFMLWQLAYAEMYFTPVFWPEFDENCLIEAVTWFVNRERRFG 244
           RTSGE RISNF+ WQ  Y+E+YF   +WP F +  L+ ++  +  RERR+G
Sbjct: 213 RTSGEERISNFLTWQSCYSELYFCETYWPTFRKVDLLRSIREYQKRERRYG 263