Pairwise Alignments

Query, 256 a.a., di-trans,poly-cis-decaprenylcistransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 264 a.a., polyprenyl diphosphate synthase from Methanococcus maripaludis JJ

 Score =  176 bits (446), Expect = 4e-49
 Identities = 94/231 (40%), Positives = 140/231 (60%), Gaps = 4/231 (1%)

Query: 18  PKHIAVIMDGNGRWAKAQGKPRVFGHKNGVAAVRKTISTSARLGIKAVTLFAFSSENWRR 77
           PKH+ +IMDGN R AK  G+    GH  G + V + I+    L I  +TL+AFS EN+ R
Sbjct: 33  PKHVGIIMDGNRRLAKKLGENPEIGHNLGASKVHEVINWCVSLKIPTITLYAFSLENFER 92

Query: 78  PEEEVGVLMELFMT--VLSTEIKKLHKNNLRLRVIGDKSRFSERLQTKIAQAEQLTASNT 135
           PE+EV VLM+LF    +   +   +HK+ +R+ VIG +    + +Q  I  AE  T + +
Sbjct: 93  PEKEVKVLMDLFEREFIEIADHPDVHKDKIRVSVIGRREMLPKYVQKAINYAEDKTKNYS 152

Query: 136 GMVVNIAANYGGQWDILQATQALAEKVTQGELQPSDIDEDVFKQHLTMADL--PDVDLLI 193
              VN A  YGGQ +I+ + + +A+ V  GE++  DI+ D+  ++L   DL  P+ DL+I
Sbjct: 153 NYFVNFAIAYGGQQEIIDSVKKIAKHVKNGEIEIEDINIDLISKNLYTGDLPSPNPDLII 212

Query: 194 RTSGECRISNFMLWQLAYAEMYFTPVFWPEFDENCLIEAVTWFVNRERRFG 244
           RTSGE RISNF+ WQ  Y+E+YF   +WP F +  L+ ++  +  RERR+G
Sbjct: 213 RTSGEERISNFLTWQSCYSELYFCETYWPTFRKVDLLRSIREYQKRERRYG 263