Pairwise Alignments

Query, 452 a.a., zinc metalloprotease from Vibrio cholerae E7946 ATCC 55056

Subject, 456 a.a., membrane-associated zinc metalloprotease, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  499 bits (1286), Expect = e-146
 Identities = 238/456 (52%), Positives = 331/456 (72%), Gaps = 4/456 (0%)

Query: 1   MTDILWNFIAFIIALGILVAVHEFGHFWVARRCGVKVEKFSIGFGKSIWKRVGHDGTEYS 60
           M D LWN  +FI+ALG+L+  HE+GHF+VARRCGVKVE+FSIGFGK+IW++VG DGTEY 
Sbjct: 1   MLDFLWNLGSFIVALGLLITAHEYGHFYVARRCGVKVERFSIGFGKTIWRKVGKDGTEYV 60

Query: 61  ISMIPLGGYVKMLDGRVDDVPAEQQAMAFDKQSLWKRSAIVSAGPIFNFLFAIFAYWLVF 120
           ++MIPLGGYVKMLD RV+DVP E +  AF+++S+W+R AIV+AGPI NF+FAI A + ++
Sbjct: 61  VAMIPLGGYVKMLDERVEDVPEELKDQAFNRKSVWQRIAIVAAGPIANFIFAIIALYFMY 120

Query: 121 MIGVPAVKPVIGEVTPYSIAAQAGLEPGMEIKAVSGVNTPDWESVNMGLIGHIGDDSMTI 180
           +IGVP++KPVI   TP S AAQ  +   M++ A+SG    +WE VN+ L+GHIGDDS+T+
Sbjct: 121 LIGVPSLKPVITSTTPGSAAAQIKVNEPMQVTAISGQAVRNWEEVNLALVGHIGDDSLTV 180

Query: 181 TVSSAEGV-GLN---EIKTINLRDWNFDPETESAMGALGFKPFTPEISNQLTNVSAQGAG 236
           +++   G+ GL+      T++ R W FDPE ES +  LG   + P I  Q+  +S   A 
Sbjct: 181 SLAPLSGLQGLDTDTRTYTLDTRQWRFDPEKESPITTLGLGVYRPAIEPQIALISEGSAA 240

Query: 237 ERAGLQVGDTVLQINGQAVEAWQQVVNAIQSHPNAPIAVMVERAGQQVELTLIPDSRELS 296
             + L+VGDT++ INGQ    WQ  V+ IQ   N P+ + V R G+Q  +++ P S + S
Sbjct: 241 ANSDLKVGDTLVAINGQQYTDWQAFVDIIQHSANVPVELTVRRNGEQFAISVTPASIKNS 300

Query: 297 QGKVIGFAGIAPKVAEWPQNYRFELQFGVFESLGKAVEKSGQVIDLTVSMLKKLLVGDVG 356
            GK IG  G++P  A+WP+N R +L++G  +S   A +K+ Q++ ++  M+ KL  GDV 
Sbjct: 301 DGKEIGVLGVSPTQAQWPENMRLQLEYGPIDSFAIAADKTWQLVAVSFKMIGKLFTGDVS 360

Query: 357 LNNLSGPISIAKGAGTTADYGFVYFLGFLALISINLGIINLVPLPMLDGGHLLFFMIEAV 416
           + NLSGPISIA+GAG +A+YG VYFLGFLALIS+NLGIINL+PLP+LDGGHLL++ +E +
Sbjct: 361 VKNLSGPISIAQGAGNSANYGLVYFLGFLALISVNLGIINLLPLPVLDGGHLLYYFVEVI 420

Query: 417 IRRPVPEKVQEMGYRIGGAIIFSLMAVAIFNDFTRL 452
             +PV EKVQE+G+R G A++  LM++A+FNDF RL
Sbjct: 421 TGKPVSEKVQEIGFRFGAALLLMLMSIALFNDFARL 456