Pairwise Alignments

Query, 803 a.a., outer membrane protein assembly factor BamA from Vibrio cholerae E7946 ATCC 55056

Subject, 795 a.a., Outer membrane protein assembly factor YaeT precursor from Pseudomonas fluorescens FW300-N2E2

 Score =  584 bits (1506), Expect = e-171
 Identities = 320/811 (39%), Positives = 465/811 (57%), Gaps = 26/811 (3%)

Query: 3   MKQILLATLLATSVSAN-GAEKFVVQDIQIDGLQRVALGAALLKMPVRVGDSVDSQDVAN 61
           MK++LL  +L   + A   AE F + DI+++GLQRV+ G+    +P+ VG+  D + +  
Sbjct: 1   MKRLLLTAVLTVLMIAEVHAESFTISDIRVNGLQRVSAGSVFGALPLNVGEQADDRRLVE 60

Query: 62  IIKALYSSGNFEDVKVLRDGNTLMVQVKERPTIASVSFSGNKAIKEEQLKQNLEASSIRV 121
             +AL+ +G F+D+++ RDGN L++ V ERP++AS+   GNKAI  E L + L+ S +  
Sbjct: 61  STRALFKTGFFQDIQLGRDGNVLVITVVERPSVASIEIEGNKAISTEDLMKGLKQSGLAE 120

Query: 122 GEALDRTTLSNIEKGLEDFYYSVGKYNATVKAVVTPLPRNRADLKFVFTEGVSAKIQQIN 181
           GE   R TL  +   L+  Y + G+Y+ATV   V P PRNR  LK    EG  A IQ IN
Sbjct: 121 GEIFQRATLEGVRNELQRQYVAQGRYSATVDTEVVPQPRNRVGLKVNINEGTVAAIQHIN 180

Query: 182 FIGNQVFSDEELLSRFNLNVDVAWWNFLA-DDKYKKQVLAGDIEALRTYYLDRGYLKFQV 240
            +GN VF DE+L+  F L     W +F   DDKY ++ L+GD+E LR+YYLDRGY+   +
Sbjct: 181 VVGNTVFPDEDLIDLFELKT-TNWLSFFKNDDKYAREKLSGDLERLRSYYLDRGYINMDI 239

Query: 241 DSTQVAISPDKKGVYITLNLNEGEPYTVSKVQFRGELMGKEAEFTSLIPFEIGETYNGSA 300
            STQV+I+PDKK VYIT+N+NEGE YTV  V+  G+L   E +  SL+  + G+ ++   
Sbjct: 240 ASTQVSITPDKKHVYITVNVNEGEKYTVRDVKLSGDLKVPEDQVKSLLLVQKGQVFSRKL 299

Query: 301 VTRLEESVKKVLGESGYAYPQVRTIPEFDDEKQQVSLVVHVEAGKRVYVRDIRFVGNNST 360
           +T   E + + LG  GY +  V  +P+  DE   V +   V+ GKR YV  I F GN  +
Sbjct: 300 MTTTSELITRRLGNEGYTFANVNGVPQPHDEDHTVDITFAVDPGKRAYVNRINFRGNTKS 359

Query: 361 RDEVLRREMRQMEGSWLNSKDIETGKTRLNRLGFFETVEVQTVRVPGSEDQVDLVYSVKE 420
            DEVLRREMRQMEG W ++  I+  KTRL RLGFF+ V V+T  VPG +DQVD+ YSV+E
Sbjct: 360 EDEVLRREMRQMEGGWASTYLIDQSKTRLERLGFFKEVNVETPAVPGVDDQVDVNYSVEE 419

Query: 421 ANSGNVNFGVGYGTESGVSFQVGLQQDNFLGSGNRVGVNAMINDYQKNLTLEYRDPYWNL 480
             SG++   VG+   +G+     + Q+NFLG+GN+V +    ++YQ      Y DPYW  
Sbjct: 420 QASGSITASVGFAQSAGLILGGSITQNNFLGTGNKVSIGLTRSEYQTRYNFGYVDPYWTA 479

Query: 481 DGVSLGGKVFY--NQFEASEAGIVDYTNESYGTSLTWGFPFDELNRFEFGIGYTHNKIGN 538
           DGVSLG   FY    ++  ++ +  Y  +S G  +  G+P  E +R  FG+    ++I  
Sbjct: 480 DGVSLGYNAFYRTTDYDELDSDVSSYAVDSLGAGVNVGYPISETSRLTFGLTAQQDEIS- 538

Query: 539 LTPYLQVENFLAAQASNIDSGGNLLTDDFDINLSWTRNNLNNSYFPTAGNHQRAFYKMTV 598
            T    V+          D   N     F  +  W+ + LN     T G+ Q    + TV
Sbjct: 539 -TGRYTVDEIFDFVEKEGDKYLN-----FKASAGWSESTLNKGVLATRGHSQSLVLETTV 592

Query: 599 PGSDAQYFKLQYDVRQYFPLTKKHEFTLLLRGRLGYGNGYGQTDGKDNLFPFYENFYAGG 658
           PGSD  +FKL Y  + + PLT    +T+ L   LGYG+GYG TDG     PFYEN+YAGG
Sbjct: 593 PGSDLSFFKLDYRGQLFQPLT--DNYTMRLHTELGYGDGYGSTDG----LPFYENYYAGG 646

Query: 659 FTSLRGFGSNSAGPKAVYRDYSGSNNGSDTATDDS-----VGGNAIALASVELIVPTPFA 713
           F S+RGF  ++ GP++     +     + T  D        GGN +    VEL+ P PF 
Sbjct: 647 FNSVRGFKDSTLGPRSTPSRGASVTGNTGTIRDPDQDPLPFGGNVLLQGGVELLFPMPFV 706

Query: 714 SEEARNQIRTSIFYDMASVWDTEFDYRGKADYGN-QYYYDYSDPTNYRSSYGVALQWVSP 772
            ++    +RTS+F+D+ +V+D+  +    ++ GN     +    +N  SS GV + WV+ 
Sbjct: 707 KDQ--RSLRTSVFWDVGNVFDSTCEDTTTSNGGNSNTECNDISLSNLASSVGVGVTWVTA 764

Query: 773 MGPLVFSLAKPIKKYEGDDEEFFTFTIGRTF 803
           +GPL F+LA PIKK +  + + F F++G+TF
Sbjct: 765 LGPLSFALAMPIKKPDDAETQVFQFSLGQTF 795