Pairwise Alignments

Query, 803 a.a., outer membrane protein assembly factor BamA from Vibrio cholerae E7946 ATCC 55056

Subject, 783 a.a., outer membrane protein assembly complex, YaeT protein from Pseudomonas stutzeri RCH2

 Score =  574 bits (1479), Expect = e-168
 Identities = 308/806 (38%), Positives = 472/806 (58%), Gaps = 28/806 (3%)

Query: 3   MKQILL-ATLLATSVSANGAEKFVVQDIQIDGLQRVALGAALLKMPVRVGDSVDSQDVAN 61
           MK++LL A + A  ++   AE F + DI+++GLQRV+ G+    +P+ VG++ D   + +
Sbjct: 1   MKRLLLPAVISALMIAEVHAESFTISDIRVNGLQRVSAGSVFGALPLNVGEAADDTRLVD 60

Query: 62  IIKALYSSGNFEDVKVLRDGNTLMVQVKERPTIASVSFSGNKAIKEEQLKQNLEASSIRV 121
             +AL+ +G F+D+++ R+G+ L++ V ERP+I+ +   GNKAIK E L   L+ S +  
Sbjct: 61  ATRALFRTGFFQDIQLGREGDVLVISVVERPSISGIEIEGNKAIKTEDLLSGLQQSGLAE 120

Query: 122 GEALDRTTLSNIEKGLEDFYYSVGKYNATVKAVVTPLPRNRADLKFVFTEGVSAKIQQIN 181
           GE   R TL  +   L+  Y + G+Y+AT++  V   PRNR  LK    EG  A I+ +N
Sbjct: 121 GEIFQRATLEGVRNELQRQYVAQGRYSATIETEVVAQPRNRVALKIKINEGSVAAIKHVN 180

Query: 182 FIGNQVFSDEELLSRFNLNVDVAWWNFLA-DDKYKKQVLAGDIEALRTYYLDRGYLKFQV 240
            +GN VF+DE+L+  F L     W +F   DDKY ++ L+GD+E LR+YYLDRGY+   +
Sbjct: 181 IVGNSVFADEDLVDLFELKT-TNWLSFFRNDDKYAREKLSGDLERLRSYYLDRGYINMDI 239

Query: 241 DSTQVAISPDKKGVYITLNLNEGEPYTVSKVQFRGELMGKEAEFTSLIPFEIGETYNGSA 300
            STQV+I+PDKK VY+T+N++EGE YTV  V+  G+L   + E  +L+  + G+ ++   
Sbjct: 240 TSTQVSITPDKKHVYVTVNIDEGERYTVRDVKLSGDLKVPQEEIEALLLAKEGQVFSRKV 299

Query: 301 VTRLEESVKKVLGESGYAYPQVRTIPEFDDEKQQVSLVVHVEAGKRVYVRDIRFVGNNST 360
           +T   E + + LG  GY +  V  +PE  DE   VS+   V+ GKR YV  I F GN  T
Sbjct: 300 MTTTSELITRRLGNEGYTFANVNGVPEAHDEDNTVSITFVVDPGKRAYVNRINFRGNTKT 359

Query: 361 RDEVLRREMRQMEGSWLNSKDIETGKTRLNRLGFFETVEVQTVRVPGSEDQVDLVYSVKE 420
            DEVLRREMRQMEG W ++  I+  KTRL RLGFF+ V V+T +VPG++DQ+D+ YSV+E
Sbjct: 360 EDEVLRREMRQMEGGWASTYLIDQSKTRLERLGFFKEVNVETPQVPGTDDQIDVNYSVEE 419

Query: 421 ANSGNVNFGVGYGTESGVSFQVGLQQDNFLGSGNRVGVNAMINDYQKNLTLEYRDPYWNL 480
             SG++   +G+   +G+     + Q+NFLG+GNRV +    ++YQ      + DPYW  
Sbjct: 420 QPSGSIMASIGFAQNAGLILGGSISQNNFLGTGNRVSLGLTRSEYQSRYNFGFVDPYWTE 479

Query: 481 DGVSLGGKVFY--NQFEASEAGIVDYTNESYGTSLTWGFPFDELNRFEFGIGYTHNKIGN 538
           DGVSLG   FY    ++  +  +  Y+ +S G  +  G+P  E +R  FG+    + +  
Sbjct: 480 DGVSLGYNAFYRTTDYDELDYDVSSYSVDSLGGGVNIGYPISETSRLSFGLTVQQDDLD- 538

Query: 539 LTPYLQVENFLAAQASNIDSGGNLLTDDFDINLSWTRNNLNNSYFPTAGNHQRAFYKMTV 598
            T    V+          DS  N     F  ++ W+ + LN     T G+ Q   ++ T+
Sbjct: 539 -TGRYTVDEIFDFMEEEGDSFLN-----FKASVGWSESTLNRGVLATRGHSQSLVFETTI 592

Query: 599 PGSDAQYFKLQYDVRQYFPLTKKHEFTLLLRGRLGYGNGYGQTDGKDNLFPFYENFYAGG 658
           PGSD  ++KL Y+ + + P++K  ++TL +  RLGYG+ YG T       PFYE++YAGG
Sbjct: 593 PGSDLSFYKLDYNGQLFVPMSK--DYTLRMHTRLGYGDAYGSTSS----LPFYEHYYAGG 646

Query: 659 FTSLRGFGSNSAGPKAVYRDYSGSNNGSDTATDD-SVGGNAIALASVELIVPTPFASEEA 717
           F S+RGF  +S GP++   D +     +D   D    GGN +    +E++ P PF  ++ 
Sbjct: 647 FNSVRGFEDSSLGPRSTPSDGTRPGTIADPDQDPLPFGGNVLIQGGLEVLFPMPFVKDQ- 705

Query: 718 RNQIRTSIFYDMASVWDTEFDYRGKADYGNQYYYDYSDPTNYRSSYGVALQWVSPMGPLV 777
              +RTS+F+D+ +V++T     G A+  +    D+ D     SS GV L W++ MGPL 
Sbjct: 706 -RSLRTSVFWDVGNVFNTNCP-SGAANCSD---IDFGD---MASSVGVGLTWITAMGPLS 757

Query: 778 FSLAKPIKKYEGDDEEFFTFTIGRTF 803
           FSLA P+ K +  D + F F++G+TF
Sbjct: 758 FSLAMPVVKPDDADTQVFQFSLGQTF 783