Pairwise Alignments

Query, 803 a.a., outer membrane protein assembly factor BamA from Vibrio cholerae E7946 ATCC 55056

Subject, 632 a.a., surface antigen (NCBI) from Rhodospirillum rubrum S1H

 Score = 64.3 bits (155), Expect = 2e-14
 Identities = 120/603 (19%), Positives = 220/603 (36%), Gaps = 93/603 (15%)

Query: 219 LAGDIEALRTYYLDRGYLKFQVDSTQVAISPDKKGVYITLNLNEGEPYTVSKV--QFRGE 276
           +  D++        RGY    + +     +P      + +  + G  Y V+KV   +RG 
Sbjct: 105 IQSDLDRFHKALRSRGYYDADLSADVRDSAPGP--AMVEVRADPGPVYQVAKVAMDYRGA 162

Query: 277 L-MGKEAEFTSLIPFEIGETYNGSAVTRLEESVKKVLGESGYAYPQVRTIPEF---DDEK 332
             +    +    +  ++G+T     V   E+ + + L +S  A P  + + +    D   
Sbjct: 163 SDVDGLPQGADAVGLKLGQTARADDVLAGEKRLSEDLRKS--ARPLAKVVDKVVVVDHAG 220

Query: 333 QQVSLVVHVEAGKRVYVRDIRFVGNNSTRDEVLRREMRQMEGSWLNSKDIETGKTRLNRL 392
           + + +   VE G       +R  G +  ++  +R+ +   EG   +   +   + RL+  
Sbjct: 221 RTMEVTYVVEPGPVADFGALRVSGLDRVKESFVRKMVPWREGEAYDEDQLRALRKRLSDS 280

Query: 393 GFFETVEVQTVRVPGSEDQVDLVYSVKEANSGNVNFGVGYGTESGVSFQVGLQQDNFLGS 452
             F TV +      G++ ++ +  +V E     ++ GV Y T++G    +  +  N LG+
Sbjct: 281 RLFATVHLTPAAEVGADGRIPIDLTVSEGAHRTISAGVSYATDTGAGATLRWEHRNLLGA 340

Query: 453 GNRVGVNAMINDYQKNLTLEYRDPYWNLDGVSLGGKVFYNQFEASEAGIVDYTNESYGTS 512
           G +   + +    +++L L +R PY+ LD           Q     A +     E+Y   
Sbjct: 341 GEKFRADVVAAQKEQSLDLTFRKPYF-LDP---------RQTLTMNASVSREDGEAYSGE 390

Query: 513 LTWGFPFDELNRFEFGIG-----YTHNKIGNLTPYLQVENFLAAQASNIDSGGNLLTDDF 567
           +            E G+G     + H ++     +   +    A  S+      L     
Sbjct: 391 VG-----------ELGMGLEREVWEHWRLSGGLAFEYGQLVWEADPSDARRRHMLA---- 435

Query: 568 DINLSWTRNNLNNSYFPTAGNH---QRAFYKMTVPGSDAQYFKLQYDVRQYFPLTKKHEF 624
            + LS  R+  ++   PT G         +   V G+   +  L+     Y+P   ++  
Sbjct: 436 GVPLSAIRDGTDDLLDPTTGTRLALAATPFAGQVDGAGTTFLVLETTGSAYYPAI-ENRL 494

Query: 625 TLLLRGRLGYGNGYGQTDGKDNLFPFYENFYAGGFTSLRGFGSNSAGPKAVYRDYSGSNN 684
            L  R RL    G   T+   N        +AGG  S+RG+G N  GP           N
Sbjct: 495 VLAGRARLASLTGADLTNVPPN-----HRLFAGGGGSVRGYGHNLIGPL----------N 539

Query: 685 GSDTATDDSVGGNAIALASVELIVPTPFASEEARNQIRTSI----FYDMASVWDTEFDYR 740
           G     DD  GG + A   V           EAR +I  +I    F D   V    +   
Sbjct: 540 GD----DDPTGGRSAAEIGV-----------EARIKITETIGIVPFLDGGLVTTESWP-- 582

Query: 741 GKADYGNQYYYDYSDPTNYRSSYGVALQWVSPMGPLVFSLAKPIKKYEGDDEEFFTFTIG 800
                        S   + R   G+ +++ +  GPL   +A P+     DD      ++G
Sbjct: 583 -------------SFSEDIRWGAGLGVRYHTSFGPLRADVAMPLNPRGSDDSFQVYISLG 629

Query: 801 RTF 803
           + F
Sbjct: 630 QAF 632