Pairwise Alignments

Query, 803 a.a., outer membrane protein assembly factor BamA from Vibrio cholerae E7946 ATCC 55056

Subject, 579 a.a., outer membrane protein assembly factor from Pantoea sp. MT58

 Score = 72.0 bits (175), Expect = 9e-17
 Identities = 109/469 (23%), Positives = 190/469 (40%), Gaps = 83/469 (17%)

Query: 331 EKQQVSLVVHVEAGKRVYVRDIRFVGNNSTRDEVLRREMRQMEGSWLNSKDIETGKTRLN 390
           E+ +    +  ++G+R    D+ F G+   R+E L+  +   EG + +S+D+     RL+
Sbjct: 175 ERHEAFWDIDYDSGERYRFGDVTFQGSQ-IREEYLQNLVPFKEGDYYSSRDLAELNRRLS 233

Query: 391 RLGFFETVEVQTVRVPGSEDQVDLVYSVKEANSGN-VNFGVGYGTESGVSFQVGLQQDNF 449
             G+F +V V      G + +V  + +V    + N +  GVGY T+ G   +   ++   
Sbjct: 234 ATGWFNSVVVAPEFSKGRQTKVLPLSAVMSPRTENTIETGVGYSTDVGPRLKGTWKKPWI 293

Query: 450 LGSGNRVGVNAMINDYQKNLTLEYRDPYWNLDGVSLGGKVFYNQFEASEAGI--VDYTN- 506
             SG+ +  +A ++  ++ + L Y+ P           K    Q+     G+   D  + 
Sbjct: 294 NDSGHSLTASAYVSAPEQQVDLSYKVPLL---------KSPLEQYYTFSGGLKRTDLNDT 344

Query: 507 ESYGTSLTWGFPFDELNRFEFGIGYTHNKIGNLTPYLQVENFLAAQASNIDSGGNLLTDD 566
           ++  T+L     +D  + ++        K  NL     +++F     +N      LL   
Sbjct: 345 KADTTTLAMSRNWDSSSGWQ--------KAVNLR--WSLDHFTQGSVTNTTM---LLYPG 391

Query: 567 FDINLSWTRNNLNNSYFPTAGNHQRAFYKM--TVPGSDAQYFKLQYDVRQYFPLTKKHEF 624
             +N + +R  L     PT G+ QR    +  T  GSD  +  LQ        L   H F
Sbjct: 392 VSVNRTRSRGGL----MPTWGDSQRYSVDVSDTTWGSDVDFLILQAQNVWIRTLGDSHRF 447

Query: 625 TLLLRGRLGYGNGYGQTDGKDNLFPFYENFYAGGFTSLRGFGSNSAGPKAVYRDYSGSNN 684
             + RG L    G+ +T+  D + P    F+AGG  S+RG+   +  P    RD  G   
Sbjct: 448 --VARGNL----GWIETNDFDKVPPDL-RFFAGGDRSIRGYKYKNISP----RDDDGK-- 494

Query: 685 GSDTATDDSVGGNAIALASVELIVPTPFASEEARNQIRTSIFYDMASVWDTEFDYRGKAD 744
                     G + +A  S+E                    +      W   F   G+A 
Sbjct: 495 --------LTGASKLATGSLEY------------------QYNVTGKWWGAVFVDSGEA- 527

Query: 745 YGNQYYYDYSDPTNYRSSYGVALQWVSPMGPLVFSLAKPIKKYEGDDEE 793
                  +    +N ++  GV ++W SP+GP+ F +A+PI    GDDEE
Sbjct: 528 ------VNDIKQSNIKTGAGVGVRWSSPVGPIKFDIARPI----GDDEE 566



 Score = 37.4 bits (85), Expect = 2e-06
 Identities = 28/109 (25%), Positives = 52/109 (47%), Gaps = 11/109 (10%)

Query: 225 ALRTYYLDRGYLKFQVDSTQVAISPDKKGVYITLNLNEGEPYTVSKVQFRGELMGKEAEF 284
           ALR  Y D  + K     +Q+ +S ++   +  ++ + GE Y    V F+G  + +E   
Sbjct: 155 ALRNGYFDGTFKK-----SQLGVSVERHEAFWDIDYDSGERYRFGDVTFQGSQI-REEYL 208

Query: 285 TSLIPFEIGETYNGSAVTRLEESVKKVLGESGYAYPQVRTIPEFDDEKQ 333
            +L+PF+ G+ Y+   +  L     + L  +G+ +  V   PEF   +Q
Sbjct: 209 QNLVPFKEGDYYSSRDLAEL----NRRLSATGW-FNSVVVAPEFSKGRQ 252