Pairwise Alignments

Query, 803 a.a., outer membrane protein assembly factor BamA from Vibrio cholerae E7946 ATCC 55056

Subject, 577 a.a., outer membrane protein assembly factor from Klebsiella michiganensis M5al

 Score = 64.7 bits (156), Expect = 1e-14
 Identities = 120/516 (23%), Positives = 196/516 (37%), Gaps = 98/516 (18%)

Query: 292 IGETYNGSAVTRLEESVKKVLGESGYAYPQVRTIPEFDDEKQQVSLVVH-------VEAG 344
           IG   N S     + S+ +V    GY         EF+  +  VSL  H         +G
Sbjct: 133 IGTVLNHSDYDGFKSSLTRVALRKGYFDS------EFNKSQLGVSLDRHQAFWDIDYNSG 186

Query: 345 KRVYVRDIRFVGNNSTRDEVLRREMRQMEGSWLNSKDIETGKTRLNRLGFFETVEVQTVR 404
           +R     + F G+   RDE L+  +   +G +  S+D+     RL   G+F +V V    
Sbjct: 187 ERYRFGPVTFEGSQ-IRDEYLQNLVPFKQGDYYTSQDLAELNRRLAATGWFSSVVVAPQF 245

Query: 405 VPGSEDQV-DLVYSVKEANSGNVNFGVGYGTESGVSFQVGLQQDNFLGSGNRVGVNAMIN 463
               + ++  L   V       V  GVGY T+ G   +   ++      G+ +  +  ++
Sbjct: 246 EKSRQTKILPLQGVVSPRKENTVETGVGYSTDVGPRVKGTWRKPWMNSYGHSLTSSLSLS 305

Query: 464 DYQKNLTLEYRDPYWNLDGVSLGGKVFYNQFEASEAGIV-DYTNESYGTSLTWGFPFDEL 522
             ++ L   Y+ P           K    Q+   + G      N++   S T G     +
Sbjct: 306 APEQQLDFSYKVPLL---------KSPLEQYYLMQGGFKRTDLNDTKADSTTLG-----V 351

Query: 523 NRF-EFGIGYTHNKIGNLTPYLQVENFLAAQASNIDSGGNLLTDDFDINLSWTRNNLNNS 581
           +RF E   G+       L     +++F  A  +N      L+     +N + +R  L   
Sbjct: 352 SRFWEMSSGWQR----ALNLRWSLDHFTQANVTNTTM---LIYPGVSVNRTRSRGGL--- 401

Query: 582 YFPTAGNHQR--AFYKMTVPGSDAQYFKLQYDVRQYFPLTKKHEFTLLLRGRLGYGNGYG 639
             PT G+ QR    Y  T+ GSD  +  +Q        L  +H F  ++RG LG+     
Sbjct: 402 -MPTWGDSQRYSVDYSNTMWGSDINFIVMQAQDVWIRTLYDRHRF--VVRGNLGWIEADN 458

Query: 640 QTDGKDNLFPFYENFYAGGFTSLRGFGSNSAGPKAVYRDYSGSNNGSDTATDDSVGGNAI 699
            +    +L      F+AGG  S+RG+   S  PK    D  G            +G + +
Sbjct: 459 FSKVPPDL-----RFFAGGDRSIRGYKYKSISPK----DDDGK----------LMGASKL 499

Query: 700 ALASVELIVPTPFASEEARNQIRTSIFYDMASVWDTEFDYRGKADYGNQYYYDYSD--PT 757
           A  S+E              Q   S        W   F   G+A          SD   +
Sbjct: 500 ATGSLEY-------------QYNVS-----GKWWGAVFVDSGEA---------VSDIRES 532

Query: 758 NYRSSYGVALQWVSPMGPLVFSLAKPIKKYEGDDEE 793
           N+++  G+ ++W SP+GP+   +A+PI    GD EE
Sbjct: 533 NFKTGAGLGVRWQSPVGPIKLDIARPI----GDKEE 564



 Score = 45.4 bits (106), Expect = 9e-09
 Identities = 52/234 (22%), Positives = 98/234 (41%), Gaps = 26/234 (11%)

Query: 109 QLKQNLEA--SSIRVGEAL-DRTTLSNIEKGLEDFYYSVGKYNATVKAVVTPLP-RNRAD 164
           +L++N+ A  S+I+  E   DR   + ++  + +   ++G Y  T+   + P P R R  
Sbjct: 34  ELEKNVRAQLSTIQSDEVTPDRRFRARVDDAIREGLKALGYYEPTIDFDLRPPPARGRQV 93

Query: 165 LKFVFTEGVSAKIQQINFIGNQVFSDEELLSRFNLNVDVAWWNFLADDKYKKQVLA---- 220
           L    T G   +I              E++ R     D  + + L        VL     
Sbjct: 94  LIAKVTPGEPVRI-----------GGTEVILRGGARTDRDYLDLLKTRPAIGTVLNHSDY 142

Query: 221 -GDIEALRTYYLDRGYLKFQVDSTQVAISPDKKGVYITLNLNEGEPYTVSKVQFRGELMG 279
            G   +L    L +GY   + + +Q+ +S D+   +  ++ N GE Y    V F G  + 
Sbjct: 143 DGFKSSLTRVALRKGYFDSEFNKSQLGVSLDRHQAFWDIDYNSGERYRFGPVTFEGSQI- 201

Query: 280 KEAEFTSLIPFEIGETYNGSAVTRLEESVKKVLGESGYAYPQVRTIPEFDDEKQ 333
           ++    +L+PF+ G+ Y    +  L     + L  +G+ +  V   P+F+  +Q
Sbjct: 202 RDEYLQNLVPFKQGDYYTSQDLAEL----NRRLAATGW-FSSVVVAPQFEKSRQ 250