Pairwise Alignments

Query, 803 a.a., outer membrane protein assembly factor BamA from Vibrio cholerae E7946 ATCC 55056

Subject, 577 a.a., Translocation and assembly module subunit TamA from Enterobacter sp. TBS_079

 Score = 64.3 bits (155), Expect = 2e-14
 Identities = 127/562 (22%), Positives = 220/562 (39%), Gaps = 100/562 (17%)

Query: 249 PDKKGVYITL-NLNEGEPYTV--SKVQFRGELMGKEAEFTSLIPF--EIGETYNGSAVTR 303
           P KKG  + +  ++ GEP  +  + V  RG     + ++  L+    + G   N      
Sbjct: 86  PPKKGRQVLIARVSPGEPVLIGGTNVILRGGAR-TDRDYLDLLSTRPKNGTVLNHGDYDH 144

Query: 304 LEESVKKVLGESGYAYPQVRTIPEFDDEKQQVSLVVH-------VEAGKRVYVRDIRFVG 356
            ++ +  V    GY   Q      FD  +  ++L  H        ++G+R    D+ F G
Sbjct: 145 FKKELTSVSLRKGYFDSQ------FDKSQLGIALDRHQAFWDIDYDSGERYRFGDVTFEG 198

Query: 357 NNSTRDEVLRREMRQMEGSWLNSKDIETGKTRLNRLGFFETVEVQTVRVPGSEDQVDLVY 416
           +   R+E L+  +   +G +  S+D+     RL+  G+F +V V        + +V  ++
Sbjct: 199 SQ-IREEYLQNLVPFKKGDYYQSRDLAELNRRLSATGWFNSVVVAPEFDKSRKTKVLPLH 257

Query: 417 SVKEANSGN-VNFGVGYGTESGVSFQVGLQQDNFLGSGNRVGVNAMINDYQKNLTLEYRD 475
            V    + N +  GVGY T+ G   +   ++      G+ +  +A I+  ++ L   Y+ 
Sbjct: 258 GVVSPRTENTIETGVGYSTDVGPRVKATWKKPWMNSYGHSLTTSASISAPEQQLDFSYKM 317

Query: 476 PYWNLDGVSLGGKVFYNQFEASEAGIVDYTNESYGTSLTWGFPFDELNRFEFGIGYTHNK 535
           P   L        +    F+ ++    +  + +   S  W          +   G+   +
Sbjct: 318 PL--LKNPLEQYYLVQGGFKRTDLNDTEADSTTLAVSRYW----------DLSSGW--QR 363

Query: 536 IGNLTPYLQVENFLAAQASNIDSGGNLLTDDFDINLSWTRNNLNNSYFPTAGNHQR--AF 593
             NL     +++F  A  +N      LL     I+ + +R  L     PT G+ QR    
Sbjct: 364 AINLR--WSLDHFTQANVTNTTM---LLYPGVMISRTRSRGGL----MPTWGDSQRYSID 414

Query: 594 YKMTVPGSDAQYFKLQYDVRQYFPLTKKHEFTLLLRGRLGYGNGYGQTDGKDNLFPFYEN 653
           Y  T+ GSD  +  +Q        L  KH F  ++RG L    G+ +T   D + P    
Sbjct: 415 YSNTMWGSDVDFSVIQAQNVWIRTLYDKHRF--VMRGNL----GWIETGDFDKVPPDL-R 467

Query: 654 FYAGGFTSLRGFGSNSAGPKAVYRDYSGSNNGSDTATDDSVGGNAIALASVELIVPTPFA 713
           F+AGG  S+RG+   S  PK    D  G            +G + +A  S+E        
Sbjct: 468 FFAGGDRSIRGYKYKSIAPK----DDDGK----------LIGASKLATGSLEY------- 506

Query: 714 SEEARNQIRTSIFYDMASVWDTEFDYRGKADYGNQYYYDYSD--PTNYRSSYGVALQWVS 771
                 Q   S        W   F   G+A          SD   +++++  GV ++W S
Sbjct: 507 ------QYNVS-----GKWWGAMFVDGGEA---------VSDIRRSDFKTGAGVGVRWQS 546

Query: 772 PMGPLVFSLAKPIKKYEGDDEE 793
           P+GP+    A P+    GD EE
Sbjct: 547 PVGPIKLDFAVPV----GDKEE 564



 Score = 48.9 bits (115), Expect = 8e-10
 Identities = 61/239 (25%), Positives = 104/239 (43%), Gaps = 24/239 (10%)

Query: 110 LKQNLEA--SSIRVGEAL-DRTTLSNIEKGLEDFYYSVGKYNATVKAVVTPLPRN-RADL 165
           L++N+ A  S+I   E   DR   + ++  + +   ++G Y  T+   + P P+  R  L
Sbjct: 35  LEKNVRAQLSTIESDEVTPDRRFRARVDDAIREGLKALGYYEPTIDFDLRPPPKKGRQVL 94

Query: 166 KFVFTEGVSAKIQQINFI---GNQVFSDE-ELLSRFNLNVDVAWWNFLADDKYKKQVLAG 221
               + G    I   N I   G +   D  +LLS    N  V   N    D +KK+    
Sbjct: 95  IARVSPGEPVLIGGTNVILRGGARTDRDYLDLLSTRPKNGTVL--NHGDYDHFKKE---- 148

Query: 222 DIEALRTYYLDRGYLKFQVDSTQVAISPDKKGVYITLNLNEGEPYTVSKVQFRGELMGKE 281
               L +  L +GY   Q D +Q+ I+ D+   +  ++ + GE Y    V F G  + +E
Sbjct: 149 ----LTSVSLRKGYFDSQFDKSQLGIALDRHQAFWDIDYDSGERYRFGDVTFEGSQI-RE 203

Query: 282 AEFTSLIPFEIGETYNGSAVTRLEESVKKVLGESGYAYPQVRTIPEFDDEKQQVSLVVH 340
               +L+PF+ G+ Y    +  L     + L  +G+ +  V   PEFD  ++   L +H
Sbjct: 204 EYLQNLVPFKKGDYYQSRDLAEL----NRRLSATGW-FNSVVVAPEFDKSRKTKVLPLH 257