Pairwise Alignments

Query, 803 a.a., outer membrane protein assembly factor BamA from Vibrio cholerae E7946 ATCC 55056

Subject, 769 a.a., membrane protein from Cupriavidus basilensis FW507-4G11

 Score =  504 bits (1297), Expect = e-147
 Identities = 287/810 (35%), Positives = 458/810 (56%), Gaps = 55/810 (6%)

Query: 4   KQILLATLLATSVSAN-----GAEKFVVQDIQIDGLQRVALGAALLKMPVRVGDSVDSQD 58
           K+I L  L +  ++A       AE FVV+DI+++GLQRV  G     +PV+VG++     
Sbjct: 5   KRISLGVLASAIIAAWTPVSWAAEPFVVKDIRVEGLQRVEPGTVFGYLPVKVGETFSDDK 64

Query: 59  VANIIKALYSSGNFEDVKVLRDGNTLMVQVKERPTIASVSFSGNKAIKEEQLKQNLEASS 118
            A+ I+ALY++G F+DV++  +   L+VQV+ERP I+ + F G K   ++ L+++L A  
Sbjct: 65  GADAIRALYNTGFFKDVQIRSEDGVLVVQVEERPAISQLEFVGIKEFDKDTLRRSLRAVG 124

Query: 119 IRVGEALDRTTLSNIEKGLEDFYYSVGKYNATVKAVVTPLPRNRADLKFVFTEGVSAKIQ 178
           +      D+  +   E+ L+  Y + G Y A ++  +TP+ RNR  + F   EG  AKI+
Sbjct: 125 VAEARYYDKALIDKAEQELKRQYVARGYYAADIQTTITPVDRNRVSVVFNVDEGPVAKIR 184

Query: 179 QINFIGNQVFSDEELLSRFNLNVD--VAWWNFLADDKYKKQVLAGDIEALRTYYLDRGYL 236
           QIN +GN+ F +  L     L+    ++W+    +D Y KQ L  D+EALR+YYL+RGYL
Sbjct: 185 QINIVGNKAFKEGTLRDEMQLSTPNWLSWYT--KNDLYSKQKLTADLEALRSYYLNRGYL 242

Query: 237 KFQVDSTQVAISPDKKGVYITLNLNEGEPYTVSKVQFRGELMGKEAEFTSLIPFEIGETY 296
           +F ++STQV+I+PDKK +++TLN+ EG+ Y VS ++  GEL+GK+AE   L+  + GE +
Sbjct: 243 EFAIESTQVSITPDKKDIFLTLNIKEGDQYKVSDIRLAGELLGKQAEMEKLLKLQKGEVF 302

Query: 297 NGSAVTRLEESVKKVLGESGYAYPQVRTIPEFDDEKQQVSLVVHVEAGKRVYVRDIRFVG 356
           +   +T+  +++  +LG  GYA+  +   P+ D EK++V+L + V+ G+RVYVR +  VG
Sbjct: 303 SSEKLTQSTKAITDLLGTYGYAFTTINPQPQIDKEKREVALTLMVDPGRRVYVRRVNVVG 362

Query: 357 NNSTRDEVLRREMRQMEGSWLNSKDIETGKTRLNRLGFFETVEVQTVRVPGSEDQVDLVY 416
           N+ TRDEV+RREMRQME SW +S+ +   ++R+NR G+F    + T  VPG+ DQVD+  
Sbjct: 363 NSKTRDEVVRREMRQMESSWFDSEKLTQSQSRINRTGYFTDTNITTEDVPGAPDQVDVNV 422

Query: 417 SVKEANSGNVNFGVGYGTESGVSFQVGLQQDNFLGSGNRVGVNAMINDYQKNLTLEYRDP 476
           +V E  +G ++ G+G+ +   +  Q GL+QDN  GSG  +G++       + ++L   DP
Sbjct: 423 NVTEKPTGQISLGLGFSSTDKLVLQAGLRQDNVFGSGTSLGLDVNTAKSFRTISLTQYDP 482

Query: 477 YWNLDGVSLGGKVFYNQFE-ASEAGIVDYTNESYGTSLTWGFPFDELNRFEFGIGY--TH 533
           Y+ +DG+S    ++Y         G  DY   S G ++ +G PF E +   FGIGY  T 
Sbjct: 483 YFTVDGISRSTDIYYRTSRPLYYTGDQDYKIVSEGGNVKFGVPFTETDTVFFGIGYERTQ 542

Query: 534 NKIGNLTPYLQVENFLAAQASNIDSGGNLLTDDFDINLSWTRNNLNNSYFPTAGNHQRAF 593
             I   TP LQ   +L    + I        ++F   + W R+  +++  PT G + +A 
Sbjct: 543 VTISPNTP-LQYGQWL----TKIGKSSGDPINNFPFTIGWARDRRDSALVPTKGPYTQAN 597

Query: 594 YKMTVPGSDAQYFKLQYDVRQYFPLTKKHEFTLLLRGRLGYGNGYGQTDGKDNLFPFYEN 653
            ++ VPG D QY++     + ++PL+K   FTL   G + YG+GYG T      FP ++N
Sbjct: 598 LEVGVPGGDTQYYRASVQQQYFYPLSK--AFTLAFNGEVAYGHGYGNTP-----FPVFKN 650

Query: 654 FYAGGFTSLRGFGSNSAGPKAVYRDYSGSNNGSDTATDDSVGGNAIALASVELIVPTPFA 713
           FYAGG  S+RG+ +++ G K    D +G          + +GG +  + +VE I P P +
Sbjct: 651 FYAGGIGSVRGYQTSTLGKK----DQNG----------NPIGGASKMIGNVEFIFPLPGS 696

Query: 714 SEEARNQIRTSIFYDMASVWDTEFDYRGKADYGNQYYYDYSDPTNYRSSYGVALQWVSPM 773
             +    +R   F+D  +V++      G     +Q  Y          S G+ + W+SP+
Sbjct: 697 GVD--RTLRLFTFFDFGNVYE-----EGAPLLFSQLKY----------STGLGMSWLSPI 739

Query: 774 GPLVFSLAKPIKKYEGDDEEFFTFTIGRTF 803
           GPL  S+  P+KK E D  + F F IG  F
Sbjct: 740 GPLKISVGFPLKKDETDKVQRFQFQIGTAF 769