Pairwise Alignments

Query, 169 a.a., chaperone protein Skp from Vibrio cholerae E7946 ATCC 55056

Subject, 168 a.a., outer membrane protein OmpH (RefSeq) from Shewanella amazonensis SB2B

 Score =  110 bits (274), Expect = 2e-29
 Identities = 53/168 (31%), Positives = 106/168 (63%), Gaps = 4/168 (2%)

Query: 1   MKNMIKAASLGLIILSSSMMANAAEAAQKIGYINTAQVFQALPQREVVLQKMQEEFKDKA 60
           M  M+  A + L+++ + + ANA    +KI  ++   VF+ LPQRE + + +++EF D+ 
Sbjct: 1   MNKMLNRALVTLMLIGAPLAANA----EKIAVVDMGAVFEQLPQREAIGKALEKEFGDRE 56

Query: 61  AELQAIQADAKTKIEKLKRDGQLMGQDEVEKLRIEIGQLDSKYKIKAQALEQASARREAE 120
           AE++ +Q D ++ +EK +RD  LM + +  +   ++  L +  ++K +AL++   RR+AE
Sbjct: 57  AEVKKLQGDLRSLMEKNQRDAALMSETQKTEALRKMEALQADLQLKGKALQEDVRRRQAE 116

Query: 121 EKQKLFKVIQDAVKKVAEKEGYDIVLDTSSMQYGKPEHNLSEKVIKAI 168
           E+ K+   +Q  +K +AEKE  D+V+ + ++ + KP+ ++S KV++A+
Sbjct: 117 EQNKILVKVQQVIKDIAEKEQIDVVMQSGAVVFAKPQLDISSKVVEAL 164