Pairwise Alignments

Query, 169 a.a., chaperone protein Skp from Vibrio cholerae E7946 ATCC 55056

Subject, 164 a.a., outer membrane chaperone Skp (OmpH) (RefSeq) from Shewanella loihica PV-4

 Score =  105 bits (261), Expect = 5e-28
 Identities = 55/165 (33%), Positives = 99/165 (60%), Gaps = 4/165 (2%)

Query: 4   MIKAASLGLIILSSSMMANAAEAAQKIGYINTAQVFQALPQREVVLQKMQEEFKDKAAEL 63
           M   A + L++L + + A A    +KI  ++   VF+ LPQRE V + ++ EF D+ A +
Sbjct: 1   MFNRAMMVLVLLGAPIAAQA----EKIAVVDMQAVFEQLPQREEVSKTLKTEFGDRVAGV 56

Query: 64  QAIQADAKTKIEKLKRDGQLMGQDEVEKLRIEIGQLDSKYKIKAQALEQASARREAEEKQ 123
           Q +Q + +  +EK +RD  LM + +  ++  ++  L ++ ++K +AL++   RR  EE+ 
Sbjct: 57  QKMQEELRGMLEKQQRDAALMSETQKTEMLRKMESLKAELQLKGKALDEDMRRRNGEEQN 116

Query: 124 KLFKVIQDAVKKVAEKEGYDIVLDTSSMQYGKPEHNLSEKVIKAI 168
           KL   +Q A+  +AEKE YD+VL   ++ Y KP  ++S KV++A+
Sbjct: 117 KLLVKVQKAISAIAEKEKYDVVLQRGAVIYVKPTSDISSKVVEAL 161