Pairwise Alignments

Query, 169 a.a., chaperone protein Skp from Vibrio cholerae E7946 ATCC 55056

Subject, 168 a.a., outer membrane protein OmpH (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  115 bits (287), Expect = 5e-31
 Identities = 59/168 (35%), Positives = 104/168 (61%), Gaps = 4/168 (2%)

Query: 1   MKNMIKAASLGLIILSSSMMANAAEAAQKIGYINTAQVFQALPQREVVLQKMQEEFKDKA 60
           M  M+  A + L +L + + A A    + I  ++   VF+ LPQRE ++Q ++ EF D+ 
Sbjct: 1   MNKMVNRALVTLALLGAPLAAQA----ENIAVVDMGAVFEQLPQREQIMQSLKSEFGDRM 56

Query: 61  AELQAIQADAKTKIEKLKRDGQLMGQDEVEKLRIEIGQLDSKYKIKAQALEQASARREAE 120
           +E+Q +Q + ++ +EK +RDG LM   +  +L  ++  L S+Y++K +AL++   RR+ E
Sbjct: 57  SEVQKMQEEMRSLMEKQQRDGALMNDTQKTELVRKMEALKSEYQLKGKALDEDLRRRQGE 116

Query: 121 EKQKLFKVIQDAVKKVAEKEGYDIVLDTSSMQYGKPEHNLSEKVIKAI 168
           E+ KL   +Q A+  +AEKE YD+VL   ++ Y KP  ++S KV++A+
Sbjct: 117 EQNKLLVKVQKAINTIAEKEKYDLVLQRGAVIYVKPNADISGKVVEAL 164