Pairwise Alignments

Query, 379 a.a., lipid-A-disaccharide synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 376 a.a., Lipid-A-disaccharide synthase (EC 2.4.1.182) from Pseudomonas fluorescens FW300-N2E2

 Score =  348 bits (894), Expect = e-100
 Identities = 188/373 (50%), Positives = 247/373 (66%), Gaps = 4/373 (1%)

Query: 5   LRIGIVVGELSGDTLGEGFIKAIRARYPDAEFVGIGGPKMNALGCQSLFDMEELAVMGLV 64
           LRI +V GE SGD LG G ++A++ ++P  EF+G+GGP M A G  S F ME L+VMGLV
Sbjct: 4   LRIALVAGEASGDILGAGLMRALKTQHPAVEFIGVGGPLMEAEGLTSYFPMERLSVMGLV 63

Query: 65  EVLGRLPRLLKVKAELVKYFTANPPDVFVGIDAPDFNLRLELSLKQAGIKTVHYVSPSVW 124
           EVLGRL  LL  + +L++      PDVF+GIDAPDF L +EL L+QAGIKTVHYVSPSVW
Sbjct: 64  EVLGRLRELLARRKKLIQTLIDEKPDVFIGIDAPDFTLNIELKLRQAGIKTVHYVSPSVW 123

Query: 125 AWRQNRIHGIAAATHLVLAFLPFEKAFYDKFNVPCEFIGHTLADSIPLASDKLAARQLLG 184
           AWRQ R+  I     L+L  LPFE  FY++  VP  F+GHTLAD+IPL +D+ AARQ LG
Sbjct: 124 AWRQKRVLKIREGCDLMLTLLPFEARFYEEKGVPVRFVGHTLADTIPLQADRDAARQALG 183

Query: 185 LDEQRRWLAVLPGSRGSEMKMLAEPFIATCQKLQARYPDLGFVVALVNAKRRAQFEQAWQ 244
           L E    +A++PGSRG E+  L   F    ++L+A  P + FV+   +A+RRAQ E    
Sbjct: 184 LPE-GPLVALMPGSRGGEVSRLGGLFFDAAERLRALRPGVRFVLPCASAQRRAQLEAL-- 240

Query: 245 QVAPELNFVLVDDTARNVITAADAVMLASGTVALECMLLKRPMVVGYRVNAFTAFLAKRL 304
            V  +L   L+D  +   + A DAV++ASGT  LE +L KRPMVV YR+   T ++ KR+
Sbjct: 241 LVGRDLPVTLLDGRSHEALAACDAVLIASGTATLEALLYKRPMVVAYRLAPLTFWILKRM 300

Query: 305 LKTPYVSLPNILAGEELVKELLQDHCTVDNLYHEVSRLLESDNQALMDKFTEMHQWIRKD 364
           +K+PYVSLPN+LA   LV ELLQD  T + L   +S L++   +     F E+H+ +R+D
Sbjct: 301 VKSPYVSLPNLLAQRLLVPELLQDEATAEALATTLSPLIDGGEEQTRG-FDEIHRTLRRD 359

Query: 365 ADQQAAQAVLHLI 377
           A  QAA AVL LI
Sbjct: 360 ASNQAADAVLTLI 372