Pairwise Alignments

Query, 379 a.a., lipid-A-disaccharide synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 376 a.a., lipid-A-disaccharide synthase from Pseudomonas fluorescens FW300-N2C3

 Score =  343 bits (881), Expect = 3e-99
 Identities = 184/373 (49%), Positives = 246/373 (65%), Gaps = 4/373 (1%)

Query: 5   LRIGIVVGELSGDTLGEGFIKAIRARYPDAEFVGIGGPKMNALGCQSLFDMEELAVMGLV 64
           +R+ +V GE SGD LG G ++A++A++P  EF+G+GGP M A G  S F ME L+VMGLV
Sbjct: 4   VRVALVAGEASGDILGAGLMRALKAQHPAVEFIGVGGPLMQAEGLTSYFPMERLSVMGLV 63

Query: 65  EVLGRLPRLLKVKAELVKYFTANPPDVFVGIDAPDFNLRLELSLKQAGIKTVHYVSPSVW 124
           EVLGRL  LL  + +L++      PDVF+GIDAPDF L +EL L+QAGIKTVHYVSPSVW
Sbjct: 64  EVLGRLRELLARRKKLIQTLIEEKPDVFIGIDAPDFTLTIELKLRQAGIKTVHYVSPSVW 123

Query: 125 AWRQNRIHGIAAATHLVLAFLPFEKAFYDKFNVPCEFIGHTLADSIPLASDKLAARQLLG 184
           AWRQ R+  I     L+L  LPFE  FY++  VP  F+GHTLAD+IPL +D+ AARQ LG
Sbjct: 124 AWRQKRVLKIREGCDLMLTLLPFEARFYEEKGVPVRFVGHTLADTIPLEADREAARQALG 183

Query: 185 LDEQRRWLAVLPGSRGSEMKMLAEPFIATCQKLQARYPDLGFVVALVNAKRRAQFEQAWQ 244
           L +    +A++PGSRG E+  L   F    ++L A  P + FV+   + +RR Q E    
Sbjct: 184 LPD-GPLVALMPGSRGGEVSRLGGLFFDAAERLLALRPGVRFVLPCASPQRRVQLEAL-- 240

Query: 245 QVAPELNFVLVDDTARNVITAADAVMLASGTVALECMLLKRPMVVGYRVNAFTAFLAKRL 304
            V  +L   L+D  + + + A DAV++ASGT  LE +L KRPMVV YR+   T ++ KR+
Sbjct: 241 LVGRDLPVTLLDGRSHDALAACDAVLIASGTATLEALLYKRPMVVAYRLAPLTFWILKRM 300

Query: 305 LKTPYVSLPNILAGEELVKELLQDHCTVDNLYHEVSRLLESDNQALMDKFTEMHQWIRKD 364
           +K+PYVSLPN+LA   LV ELLQD  T + L   +S L++   +     F E+H+ +R+D
Sbjct: 301 VKSPYVSLPNLLAQRLLVPELLQDDATAEALASTLSPLIDGGEEQTRG-FDEIHRTLRRD 359

Query: 365 ADQQAAQAVLHLI 377
           A  QAA AVL LI
Sbjct: 360 ASNQAADAVLTLI 372