Pairwise Alignments

Query, 379 a.a., lipid-A-disaccharide synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 399 a.a., lipid-A-disaccharide synthase from Synechococcus elongatus PCC 7942

 Score =  152 bits (383), Expect = 2e-41
 Identities = 117/383 (30%), Positives = 182/383 (47%), Gaps = 14/383 (3%)

Query: 5   LRIGIVVGELSGDTLGEGFIKAIRARYP----DAEFVGIGGPKMNALGCQSLFDMEELAV 60
           +R+ I  GE+SGD  G   I A+  +      + E + +GG +M A G + L +   ++ 
Sbjct: 4   IRLFISTGEVSGDLQGSLLIAALFRQAKQLGLELEILALGGDRMAAAGAKLLANTIGISS 63

Query: 61  MGLVEVLGRLPRLLKVKAELVKYFTANPPDVFVGID--APDFNLRLELSLKQAGIKTVHY 118
           +G+ E L  +    +++ ++ +       D  + ID   P+      L      I   +Y
Sbjct: 64  IGIWEALPYVWPTWRLQQKIARQIRETSLDAAILIDYIGPNIGWGGRLPKSHPNIPIFYY 123

Query: 119 VSPSVWAWR--QNRIHGIAAATHLVLAFLPFEKAFYDKFNVPCEFIGHTLADSIPLASDK 176
           ++P  W W   + +   +   +  + A  P E  +Y        F+GH L D +    D+
Sbjct: 124 IAPQEWVWSFGEGKTTQLVNFSDRIFAIFPGEATYYRDRGAAVSFVGHPLIDQLQDRPDR 183

Query: 177 LAARQLLGLDEQRRWLAVLPGSRGSEMKMLAEPFIATCQKLQARYPDLGFVVALVNAKRR 236
             AR  LGL EQ R +A+ P SR  E+K L    +A  Q+L A  P+L F V L   K R
Sbjct: 184 AKARAQLGLQEQERAIALYPASRPQELKFLLPTVLAAAQQLNAELPNLRFFVPLSQEKFR 243

Query: 237 AQFEQAWQQVAPELNFVLVDDTARNVITAADAVMLASGTVALECMLLKRPMVVGYRVNAF 296
              E+A +++   L  V  + TA  V  AAD  +  SGTV LE  L   P VV YRV A 
Sbjct: 244 TTIEEAARELNLPLQIVSGETTAL-VQAAADLAIAKSGTVNLELGLQGIPQVVVYRVGAV 302

Query: 297 TAFLAKRLLK--TPYVSLPNILAGEELVKELLQDHCTVDNLYHEVSR-LLESDNQALMDK 353
           TA++A+ +L+   P++S  N++  E +V ELLQD    D +  E    LL+ D QA +  
Sbjct: 303 TAWIARHILRFSIPFMSPVNLVDMEAIVPELLQDEANPDRIAAEAKAILLDPDRQAAIQA 362

Query: 354 -FTEMHQWI-RKDADQQAAQAVL 374
            +  M Q +       +AAQ +L
Sbjct: 363 GYQRMRQSLGEPGVCDRAAQEIL 385