Pairwise Alignments

Query, 379 a.a., lipid-A-disaccharide synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 393 a.a., lipid-A-disaccharide synthase (RefSeq) from Shewanella amazonensis SB2B

 Score =  423 bits (1088), Expect = e-123
 Identities = 215/376 (57%), Positives = 271/376 (72%)

Query: 2   NRPLRIGIVVGELSGDTLGEGFIKAIRARYPDAEFVGIGGPKMNALGCQSLFDMEELAVM 61
           ++PL   +V GELSGD LG G +KA++AR+PDA FVGIGGP+M ALG +SLF MEELAVM
Sbjct: 4   SKPLVFAMVAGELSGDILGAGLVKALKARHPDARFVGIGGPRMEALGFESLFAMEELAVM 63

Query: 62  GLVEVLGRLPRLLKVKAELVKYFTANPPDVFVGIDAPDFNLRLELSLKQAGIKTVHYVSP 121
           G+VEVL RLPRLLKV++ LV    A  PD F+GIDAPDFN+ +EL LKQ GIKTVHYVSP
Sbjct: 64  GIVEVLSRLPRLLKVRSSLVSQLLALKPDCFIGIDAPDFNIGVELKLKQQGIKTVHYVSP 123

Query: 122 SVWAWRQNRIHGIAAATHLVLAFLPFEKAFYDKFNVPCEFIGHTLADSIPLASDKLAARQ 181
           SVWAWR  RI  IA AT++VL+ LPFEKAFYD+  VPC F+GHTLAD IPL   K  AR+
Sbjct: 124 SVWAWRPKRIFKIAKATNMVLSLLPFEKAFYDQHQVPCTFVGHTLADDIPLELSKADARE 183

Query: 182 LLGLDEQRRWLAVLPGSRGSEMKMLAEPFIATCQKLQARYPDLGFVVALVNAKRRAQFEQ 241
            LGLD    +LA+LPGSRG E+KML+EPFI     ++   PD+ F+  LVN KRR QF  
Sbjct: 184 TLGLDRDAEYLAILPGSRGGELKMLSEPFIKAAVAIKEALPDVRFITPLVNEKRREQFLT 243

Query: 242 AWQQVAPELNFVLVDDTARNVITAADAVMLASGTVALECMLLKRPMVVGYRVNAFTAFLA 301
           A +  AP L   L D  +R ++ A+D ++LASGT  LE ML+KRPMVV YRV   T  +A
Sbjct: 244 ALETHAPGLEIQLFDGQSREIMAASDGILLASGTATLEAMLVKRPMVVAYRVAPLTYSIA 303

Query: 302 KRLLKTPYVSLPNILAGEELVKELLQDHCTVDNLYHEVSRLLESDNQALMDKFTEMHQWI 361
            R++     SLPN+L+G++LV EL+Q  CT   +  EV  ++  DN+AL+ +FTEMHQ +
Sbjct: 304 SRMMLIKRYSLPNLLSGKDLVPELIQADCTPQKIASEVVAMMNRDNRALIAEFTEMHQNL 363

Query: 362 RKDADQQAAQAVLHLI 377
           R++A ++AA AV  LI
Sbjct: 364 RQNASERAADAVDVLI 379