Pairwise Alignments

Query, 379 a.a., lipid-A-disaccharide synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 393 a.a., lipid-A-disaccharide synthase LpxB from Phaeobacter inhibens DSM 17395

 Score =  191 bits (485), Expect = 3e-53
 Identities = 131/381 (34%), Positives = 192/381 (50%), Gaps = 12/381 (3%)

Query: 5   LRIGIVVGELSGDTLGEGFIKAIRARYPDAEFVGIGGPKMNALGCQSLFDMEELAVMGLV 64
           LR+ I+ GE SGD LG   +  +R   PD  F G+GG  M   G  S FDM EL+VMGL 
Sbjct: 3   LRVFILAGEPSGDRLGGALMAGLRQLRPDVSFEGVGGALMAEQGLVSRFDMSELSVMGLA 62

Query: 65  EVLGRLPRLLKVKAELVKYFTANPPDVFVGIDAPDFNLRLELSLK-QAGIKTVHYVSPSV 123
           EVL +  +L +   E  +      PDV + ID+PDF+LR+   +K ++ I+TVHYV+PSV
Sbjct: 63  EVLPKYRQLKRRIRETAEAVLDMKPDVMITIDSPDFSLRVAALVKEESSIRTVHYVAPSV 122

Query: 124 WAWRQNRIHGIAAATHLVLAFLPFEKAFYDKFNVPCEFIGHTLADSIPLASDKLAA-RQL 182
           WAWR  R   +A     VLA LPFE  +     + C+F+GH +       ++++AA RQ 
Sbjct: 123 WAWRPKRAEKMAKVIDHVLALLPFEPPYMQAAGMECDFVGHPVVGEPQATAEEIAAFRQA 182

Query: 183 LGLDEQRRWLAVLPGSRGSEMKMLAEPFIATCQKLQARYPDLGFVVALVN--AKRRAQFE 240
             LD+    LA LPGSR SE+  LA  F A  ++ Q  +P+   VV      A       
Sbjct: 183 YQLDDTPTVLA-LPGSRRSEVTRLAPVFGAALKQFQDSHPEYRIVVPAAGPVADLVRSHL 241

Query: 241 QAWQQVAPELNFVLVDDTA-----RNVITAADAVMLASGTVALECMLLKRPMVVGYRVNA 295
             W   A  ++   +D        R    AAD  + ASGTV+LE    + PMV+ Y+   
Sbjct: 242 AEWSDTAVVIDPNTLDGEVAKAHKRAAFAAADLALAASGTVSLELAAARTPMVIAYKFQW 301

Query: 296 FTAFLAKRLLKTPYVSLPNILAGEELVKELLQDHCTVDNLYHEVSRLLESDNQALMDKFT 355
            T  + +R+     V+L N+++   +V E L   CT + +   + ++    +       T
Sbjct: 302 LTWHIMRRMALIDTVTLVNLVSDTRVVPECLGPECTPEAIAKALIKVKADPSAQSSAMAT 361

Query: 356 EMHQWIR--KDADQQAAQAVL 374
            M +     +D   +AA+AVL
Sbjct: 362 TMERLGEGGEDPGLRAARAVL 382