Pairwise Alignments

Query, 379 a.a., lipid-A-disaccharide synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 410 a.a., lipid-A-disaccharide synthase (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  181 bits (459), Expect = 3e-50
 Identities = 112/345 (32%), Positives = 173/345 (50%), Gaps = 9/345 (2%)

Query: 4   PLRIGIVVGELSGDTLGEGFIKAIRARYPDAEFVGIGGPKMNALGCQSLFDMEELAVMGL 63
           P  + I  GELSGD  G   ++A+  R P    +G+GGP +   G  ++  +E+L+VMG+
Sbjct: 42  PRTVWINAGELSGDMHGGRLLEALLRRDPSLRCIGMGGPHLRGAGQDAILRVEDLSVMGI 101

Query: 64  VEVLGRLPRLLKVKAELVKYFTANPPDVFVGIDAPDFNLRLELSLKQAGIKTVHYVSPSV 123
            EVLG LPR+L +   +     A  PD  V IDAP+FN R+  +    GI   +Y+SP +
Sbjct: 102 TEVLGYLPRILGMLRRIKAELAARRPDAVVLIDAPEFNFRIASAAHALGIPVHYYISPKI 161

Query: 124 WAWRQNRIHGIAAATHLVLAFLPFEKAFYDKFNVPCEFIGHTLADSIPLASDKLAARQLL 183
           WAWR  R++ I      ++  LPFE  FY +  +  +++G+ L D +         ++L 
Sbjct: 162 WAWRTGRVNFIRRHIRRMICILPFEVEFYRRHGMDVDYVGNPLLDVMDW-------QRLD 214

Query: 184 GLDEQRRWLAVLPGSRGSEMKMLAEPFIATCQKLQARYPDLGFVVALVNAKRRAQFEQAW 243
            +      + ++PGSR  E++ L   +    + L A  P L F                W
Sbjct: 215 AIAPVPGRIGLMPGSRRKEIEALMPEYGKAARLLLADRPGLSFHCVRAPNVTEDALRALW 274

Query: 244 QQVAPELNFVLVDDTARNVITAADAVMLASGTVALECMLLKRPMVVGYRVNAFTAFLAKR 303
               P L     DD    + T    ++ ASGT  LE  LL  P +V YRV++F+ +L KR
Sbjct: 275 PADVP-LTIESPDDRYATLRT-CQLLLAASGTATLETALLGVPTLVAYRVSSFSYWLGKR 332

Query: 304 LLKTPYVSLPNILAGEELVKELLQDHCTVDNLYHEVSRLLESDNQ 348
           L+K  +VSLPN++   E+  ELLQ++     L    SR L++  +
Sbjct: 333 LVKVRWVSLPNLVLNREVFPELLQENADGAVLARHASRWLDTPGE 377