Pairwise Alignments

Query, 206 a.a., ribonuclease HII from Vibrio cholerae E7946 ATCC 55056

Subject, 218 a.a., Ribonuclease H (NCBI) from Rhodospirillum rubrum S1H

 Score =  154 bits (388), Expect = 2e-42
 Identities = 89/188 (47%), Positives = 115/188 (61%), Gaps = 5/188 (2%)

Query: 21  IAGVDEVGRGPLVGDVVTAAVILDPNRP----IMGLNDSKKLSEKKRLALFPEIQVK-AL 75
           +AGVDEVGRGPL G VV AAV++D  R     +  L+DSKKLS   R  L   +     +
Sbjct: 14  VAGVDEVGRGPLAGPVVAAAVVIDAGRADPALLARLDDSKKLSAALRQRLATALLADPGV 73

Query: 76  AWAVGRCSPQEIDELNIFQATMVAMQRAVAGLRIQPDLVLIDGNKIPKLPMEAQAVVKGD 135
              +G  S  EID +NI QAT +AM RA+A L    DL L+DGN++P LP   QAVV+GD
Sbjct: 74  EVGLGEASVAEIDRINILQATFLAMGRALAKLAPPVDLALVDGNRLPPLPCPGQAVVRGD 133

Query: 136 LRVAQISAASIIAKVIRDQEMEALDKQYPQFGFAKHKGYPTAAHFAAIEQHGVIEQHRKS 195
                I+AASI+AKV RD  M  L +  P +G+ ++ GY TA H AA+++ G    HR S
Sbjct: 134 GLSLSIAAASIVAKVHRDAAMATLAQALPGYGWERNAGYGTAEHLAALDRLGATPHHRAS 193

Query: 196 FGPVKRAL 203
           F PV+ AL
Sbjct: 194 FAPVREAL 201