Pairwise Alignments

Query, 206 a.a., ribonuclease HII from Vibrio cholerae E7946 ATCC 55056

Subject, 209 a.a., ribonuclease HII (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  256 bits (654), Expect = 2e-73
 Identities = 131/190 (68%), Positives = 156/190 (82%), Gaps = 5/190 (2%)

Query: 19  ALIAGVDEVGRGPLVGDVVTAAVILDPNRPIMGLNDSKKLSEKKRLALFPEIQVKALAWA 78
           +L+AGVDEVGRGPLVGDVVTAAVILDPNRPI+GLNDSKKL+EK+R ALF EI  KAL++ 
Sbjct: 18  SLVAGVDEVGRGPLVGDVVTAAVILDPNRPILGLNDSKKLTEKRREALFDEICEKALSFH 77

Query: 79  VGRCSPQEIDELNIFQATMVAMQRAVAGLRIQPDLVLIDGNKIPK-----LPMEAQAVVK 133
           VGR SP EIDELNI  ATM+AMQRAV+GL++ P LVL+DGN+ P      L + + +++K
Sbjct: 78  VGRASPAEIDELNILHATMLAMQRAVSGLKLTPALVLVDGNRSPAFTHQGLSLASHSIIK 137

Query: 134 GDLRVAQISAASIIAKVIRDQEMEALDKQYPQFGFAKHKGYPTAAHFAAIEQHGVIEQHR 193
           GD  +A ISAASIIAKV RD+EM+ALD  YPQ+GFAKHKGYPT AHF AI +HGV +Q+R
Sbjct: 138 GDGLIASISAASIIAKVTRDREMDALDAAYPQYGFAKHKGYPTKAHFEAIAEHGVFDQYR 197

Query: 194 KSFGPVKRAL 203
           KSF PVK  L
Sbjct: 198 KSFKPVKALL 207