Pairwise Alignments

Query, 206 a.a., ribonuclease HII from Vibrio cholerae E7946 ATCC 55056

Subject, 206 a.a., Ribonuclease H (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  160 bits (405), Expect = 2e-44
 Identities = 93/188 (49%), Positives = 118/188 (62%), Gaps = 2/188 (1%)

Query: 17  GYALIAGVDEVGRGPLVGDVVTAAVILDPNRPIMGLNDSKKLSEKKRLALFPEIQVKALA 76
           GY  IAGVDEVGRGPL G V+ AAV+LDP     GLNDSK+++ K+R AL  ++   A  
Sbjct: 16  GYLRIAGVDEVGRGPLAGPVMAAAVVLDPGAIPEGLNDSKQVTAKRREALAAQLAQVAQV 75

Query: 77  WAVGRCSPQEIDELNIFQATMVAMQRAVAGLRIQPDLVLIDGNKIPK-LPMEAQAVVKGD 135
             VG     EID LNI +A  +AM RA+  L   PD+ LIDG   P  LP  A A++KGD
Sbjct: 76  -GVGVAEVAEIDRLNIRRAAHLAMLRALDALPAPPDMALIDGRDRPDDLPCAAHAIIKGD 134

Query: 136 LRVAQISAASIIAKVIRDQEMEALDKQYPQFGFAKHKGYPTAAHFAAIEQHGVIEQHRKS 195
            +   I+AASI+AKV RD+ M AL  ++P +G+  + GYPT AH AA+   GV   HR+S
Sbjct: 135 TKSLSIAAASIVAKVARDRVMTALAAEFPGYGWETNAGYPTQAHRAALLDIGVSPHHRRS 194

Query: 196 FGPVKRAL 203
           F PV   L
Sbjct: 195 FRPVHNIL 202