Pairwise Alignments

Query, 1159 a.a., DNA polymerase III subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 447 a.a., DNA polymerase III subunit alpha from Synechococcus elongatus PCC 7942

 Score =  179 bits (455), Expect = 3e-49
 Identities = 119/401 (29%), Positives = 203/401 (50%), Gaps = 16/401 (3%)

Query: 756  FNKSHSAAYALVSYQTLWLKTHYPAEFMAAVMTADMDNTEKVVGLVDECKNMGLTVLPPD 815
            FNKSHS AY  V++QT +LK ++P E+MAA++T +  N +KV   +  C  MG+ VLPPD
Sbjct: 38   FNKSHSTAYGYVTFQTAYLKANFPVEYMAALLTVNSGNADKVQKYIANCAAMGIEVLPPD 97

Query: 816  INSGLYRFNVDDNGAIVYGIGAIKGVGEGPIEAILEARNKGGYFKDLFDFCARIDLKKVN 875
            IN     F       I++G+ AI+ +G G IE+IL AR+ GG F  L D C R+D   +N
Sbjct: 98   INRSGVDF-TPTGDRILFGLSAIRNLGLGAIESILAARDVGGPFLSLADLCDRVDTGSLN 156

Query: 876  KRVIEKLILAGALDRL--GPHRAAMMASVDDAVRAASQHHQAEAFGQADMFGVL-----T 928
            +R +E LI AGALD L  G +R  ++A +   +  A+   +  A GQ ++F +L      
Sbjct: 157  RRAMESLIHAGALDVLETGANRQQLVADLPLVIDWANSRAKDRASGQGNLFDMLGSNDSN 216

Query: 929  DAPEEVEQKYTQVPEWPEKVRLEGERETLGLYLTGHPVDEYLKELTKYTSCRLNEAAPTR 988
             +P +   K   VP++    +L+ E+E LG YL+ HP+    +         +++     
Sbjct: 217  SSPLDTAPKAPAVPDYSPDEKLKLEKELLGFYLSDHPLKVVQEPARLLAPASISDLEDYC 276

Query: 989  RDQSLTVAGLVIAARVMTTKRGTRIGLMTLDDRSGRMEVMLYSEALDRYAEWLEKDKILV 1048
                ++   L+   + + TK+G R+ ++ ++D SG  E +++  + +R   ++E D  L+
Sbjct: 277  DRGLISTIALLTEVKPVVTKKGDRMAILRIEDLSGNTEAVVFPRSYERIGHYIEADARLM 336

Query: 1049 VSGQVSFDDFNGGLKMSAREVMDLGSAREKFARGLSISILQSQIDQQFFERFSHILEPHR 1108
            + G+V  D  +  ++    +   +   R      LS+      + QQ  +    +L+  R
Sbjct: 337  LWGKV--DRRDDQVQFIIEDAEPIDHVRLVLVE-LSVEQASDIVQQQRLKEL--LLQQKR 391

Query: 1109 ---AGTVPVNVYYQRPDARARLTLGTEWRVTPSDTLLDELK 1146
                  VPV    Q    R  + LG ++RV   +  ++ L+
Sbjct: 392  EEERSKVPVVAVIQAGSDRYFVRLGAQFRVEDPEEAVEALQ 432