Pairwise Alignments

Query, 1159 a.a., DNA polymerase III subunit alpha from Vibrio cholerae E7946 ATCC 55056

Subject, 1160 a.a., DNA polymerase III subunit alpha from Klebsiella michiganensis M5al

 Score = 1806 bits (4678), Expect = 0.0
 Identities = 877/1160 (75%), Positives = 1011/1160 (87%), Gaps = 1/1160 (0%)

Query: 1    MSDPKFIHLRIHSDFSMVDGLSKVPPLVKKVAAMGMPAMALTDFTNLCGLVKFYSTAHNC 60
            M++P+F+HLR+HSD+SM+DGL+K  PLVKK AA+GMPA+A+TDFTNLCGLVKFY   H  
Sbjct: 1    MAEPRFVHLRVHSDYSMIDGLAKTGPLVKKAAALGMPALAITDFTNLCGLVKFYGAGHGA 60

Query: 61   GVKPIIGADFTLQSEEFGDELTKLTLLAKNNVGYKNLTLLISKAYLRGHVQHQPVIDKAW 120
            G+KPI+GADF +QS+  GDEL++LT+LA NN GY+NLTLLISKAY RG+    P+ID+ W
Sbjct: 61   GIKPIVGADFHVQSDLLGDELSQLTVLAANNAGYQNLTLLISKAYQRGYGAAGPIIDRDW 120

Query: 121  LVEHAEGLIVLSGGKSGEVGRALLKGNQQQVERCIEFYQTHFADHFYLELIRTGRADEES 180
            L+E  EGLI+LSGG+ G+VGR+LL+GN   V++C++FY+ HF D ++LELIRTGR DEE 
Sbjct: 121  LIELKEGLILLSGGRMGDVGRSLLRGNMALVDQCVDFYEQHFPDCYFLELIRTGRQDEEP 180

Query: 181  YLHFALDVAEQYDLPVVATNEVVFITEESFEAHEIRVAIHDGYTLEDPRRPKNYSPKQYL 240
            YLH A+ +AE   LPVVATN+V F+    F+AHEIRVAIHDG+TL+DP+RP+NYSP+QY+
Sbjct: 181  YLHAAVGLAETRGLPVVATNDVRFLEPGDFDAHEIRVAIHDGFTLDDPKRPRNYSPQQYM 240

Query: 241  RSEAEMCELFADIPEALANSVEIAKRCNVTVRLGEYFLPNFPTGGMAIEDFLVMKSREGL 300
            RSE EMCELF+DIPEAL N+VEIAKRCNVTVRLGEYFLP FPTG M  ED+LV KS+EGL
Sbjct: 241  RSEEEMCELFSDIPEALQNTVEIAKRCNVTVRLGEYFLPQFPTGDMTTEDYLVKKSKEGL 300

Query: 301  EERLEFLFPDPEVRAKRRPEYDERLQVELDVINQMGFPGYFLIVMEFIQWSKDNDIPVGP 360
            EERLEFLFPDP+ R KRRPEYDERL +EL VINQMGFPGYFLIVMEFIQWSKDN +PVGP
Sbjct: 301  EERLEFLFPDPDERTKRRPEYDERLDIELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGP 360

Query: 361  GRGSGAGSLVAYALKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDKRDQVIDHVAE 420
            GRGSGAGSLVAYALKITDLDPLE+DLLFERFLNPERVSMPDFDVDFCM+KRDQVI+HVA+
Sbjct: 361  GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAD 420

Query: 421  MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPFGFVDRISKLVPPDPGMTLEKAFIAEPA 480
            MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHP+GFVDRISKLVPPDPGMTL KAF AEP 
Sbjct: 421  MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ 480

Query: 481  LQELYDADEEVKELIDKCRILEGCTRNAGKHAGGVVISPTAITDFAPIYCDAEGNFPVTQ 540
            L E+Y+ADEEVK LID  R LEG TRNAGKHAGGVVI+PT ITDFAP+YCD  G  PVTQ
Sbjct: 481  LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEAGQHPVTQ 540

Query: 541  FDKNDVETAGLVKFDFLGLRTLTIIDWALGLVNPRLKKAGKPPVRIEAIPLDDARSFRNL 600
            FDKNDVE AGLVKFDFLGLRTLTII+WAL ++N R +K G+ P+ I AIPLDD +SF  L
Sbjct: 541  FDKNDVEYAGLVKFDFLGLRTLTIINWALEMINARREKNGEGPLDIAAIPLDDKKSFDML 600

Query: 601  QDAKTTAVFQLESRGMKELIKRLQPDCFEDIIALVALFRPGPLQSGMVDNFIDRKHGREA 660
            Q ++TTAVFQLESRGMK+LIKRLQPDCFED+IALVALFRPGPLQSGMVDNFIDRKHGRE 
Sbjct: 601  QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE 660

Query: 661  ISYPDEKWQHESLKEILEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM 720
            ISYPD +WQHE LK +LEPTYGIILYQEQVMQIAQ LSGYTLGGADMLRRAMGKKKPEEM
Sbjct: 661  ISYPDVQWQHECLKPVLEPTYGIILYQEQVMQIAQELSGYTLGGADMLRRAMGKKKPEEM 720

Query: 721  AKQRAVFQEGAEKNGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHYPA 780
            AKQR  F+EGA K GVDGELA+KIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLK HYPA
Sbjct: 721  AKQRGTFEEGARKRGVDGELAIKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA 780

Query: 781  EFMAAVMTADMDNTEKVVGLVDECKNMGLTVLPPDINSGLYRFNVDDNGAIVYGIGAIKG 840
            EFMAAVMTADMDNTEKVVGLVDEC  MGL +LPPDINSGLY F+V+D+G IVYGIGAIKG
Sbjct: 781  EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG 840

Query: 841  VGEGPIEAILEARNKGGYFKDLFDFCARIDLKKVNKRVIEKLILAGALDRLGPHRAAMMA 900
            VGEGPIEAI+EARN+GGYF++LFD CAR D+KK+N+RV+EKLI++GA DRLGPHRAA+M 
Sbjct: 841  VGEGPIEAIIEARNQGGYFRELFDLCARTDIKKLNRRVLEKLIMSGAFDRLGPHRAALMN 900

Query: 901  SVDDAVRAASQHHQAEAFGQADMFGVLTDAPEEVEQKYTQVPEWPEKVRLEGERETLGLY 960
            S+ DA++AA QH +AEA GQADMFGVL + PE++EQ Y     WPE+V L+GERETLGLY
Sbjct: 901  SLGDALKAADQHAKAEAIGQADMFGVLAEEPEQIEQSYANCQPWPEQVVLDGERETLGLY 960

Query: 961  LTGHPVDEYLKELTKYT-SCRLNEAAPTRRDQSLTVAGLVIAARVMTTKRGTRIGLMTLD 1019
            LTGHP+++YLKE+ +Y    RL +  PT R +  T AGLVIAARVM TKRG RIG+ TLD
Sbjct: 961  LTGHPINQYLKEIERYVGGVRLKDMHPTDRGKVTTAAGLVIAARVMVTKRGNRIGICTLD 1020

Query: 1020 DRSGRMEVMLYSEALDRYAEWLEKDKILVVSGQVSFDDFNGGLKMSAREVMDLGSAREKF 1079
            DRSGR+EVML+++ALD+Y + LEKD+IL+VSGQVSFDDF+GGLKM+AREVMD+  AREK+
Sbjct: 1021 DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKY 1080

Query: 1080 ARGLSISILQSQIDQQFFERFSHILEPHRAGTVPVNVYYQRPDARARLTLGTEWRVTPSD 1139
            ARGL+IS+   QID Q   R    LEPHR+GT+PV++YYQR DARARL  G  WRV+PSD
Sbjct: 1081 ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSD 1140

Query: 1140 TLLDELKQLLGHDQVELEFN 1159
             LL++L+ L+G +QVELEF+
Sbjct: 1141 RLLNDLRGLIGSEQVELEFD 1160