Pairwise Alignments

Query, 440 a.a., tRNA(Ile)-lysidine synthetase from Vibrio cholerae E7946 ATCC 55056

Subject, 474 a.a., tRNA(Ile)-lysidine synthetase (RefSeq) from Shewanella loihica PV-4

 Score =  261 bits (668), Expect = 3e-74
 Identities = 169/442 (38%), Positives = 236/442 (53%), Gaps = 31/442 (7%)

Query: 13  ARYPFRKILLALSGGVDSQVL---LALLARGRDEFGWDVTAVHVHHGLSPNADQWAQYCQ 69
           A  P  K++LA SGGVDS+VL   L+L A+   EF +    VHVHHGLS NAD W  +C+
Sbjct: 32  ATKPAMKLVLAYSGGVDSEVLAHGLSLFAKQHPEFNY--LLVHVHHGLSANADSWQSHCE 89

Query: 70  RCCREVGMACQIEYVQLDVASGESIEKLAREARYRVLAPHVNAQTLLLLGQHADDQLETF 129
           R  RE G+   ++ V +   +  S+E  AREARY  L   +    +LL   H DDQLET 
Sbjct: 90  RRAREYGLPISVKRVTVASGARISLEAAAREARYDALRSELAPGDILLTAHHQDDQLETL 149

Query: 130 LLALKRGSGPKGLAAMAAYAPFA-EGHLLRPLLTVSRQHIEAYAKQHKLTWVIDESNADI 188
           LLALKRG GPKGLAAM     F  +  LLRPLLT SR  IEA+A    L+ + DESN D 
Sbjct: 150 LLALKRGLGPKGLAAMGEVQAFTPDNPLLRPLLTSSRAQIEAFAMAEGLSHIEDESNKDS 209

Query: 189 RYERNFLRHQVTPVLTERWPSIRQAVQRSAELCAEQEALLQEFLAEALKKAI-----TAE 243
           R++RNFLR++V P+LT RWP+      RSA+LCAEQ+AL+ E ++  L   +     +  
Sbjct: 210 RFDRNFLRNEVLPILTARWPAFAATASRSAQLCAEQQALIDEEVSLCLPAMLLSVPHSQA 269

Query: 244 GGLSIAVLAEGSEGMRRQLIRAWFAHHRLPMPSRQHTERIWCEVALASEDANPKLKLNHI 303
             L +  LAE     R  L+R +  H   P+PS      I  ++  A +DA   +++  +
Sbjct: 270 AVLDLKALAEQPGRWRPHLLRGFIEHRGFPLPSAAQLGDILAQLE-AKDDAQVAIRIRSM 328

Query: 304 EVRRFQHCLYLVPPE-------------KDLSGWRSALVPEQRLPLPQGLGHLQLTSKAG 350
            +RRFQ+ LYL P E             +D+    S L      P+      +   S  G
Sbjct: 329 VLRRFQYALYLDPVEVAPRVEQVLQGLDEDVRSHGSTL----SWPIDSQSQLVANWSLTG 384

Query: 351 GNIKLPDDPSQLWVSFEPQGLEAC-PVGRVGSRKLKKLFQEYGVPSWRRRQTPILMYQNR 409
             ++L     ++ + F   G   C P GR   R+LKKL+QE+ VP W R + P++    +
Sbjct: 385 PRLRLA-KAGEVMLRFGASGSLRCHPHGRDKGRELKKLWQEFAVPPWERGRIPLIFSGEQ 443

Query: 410 VVCVADLFVDRDWSGQDCELVW 431
           +V    L+VD+ +   + E  W
Sbjct: 444 LVAAVGLWVDKRYLADEGEGGW 465