Pairwise Alignments

Query, 440 a.a., tRNA(Ile)-lysidine synthetase from Vibrio cholerae E7946 ATCC 55056

Subject, 464 a.a., cell cycle protein MesJ (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  253 bits (646), Expect = 9e-72
 Identities = 165/454 (36%), Positives = 247/454 (54%), Gaps = 30/454 (6%)

Query: 3   DLYLHFVQQLARYPFR---KILLALSGGVDSQVL---LALLARGRDEFGWDVTAVHVHHG 56
           DL +H  + L   P +   K++LA SGGVDS+VL   L+  A+ R +  + +  ++VHHG
Sbjct: 5   DLSVHIARWLDSLPLQAGSKLVLAYSGGVDSEVLAYGLSEYAKQRPDLRYQL--IYVHHG 62

Query: 57  LSPNADQWAQYCQRCCREVGMACQIEYVQLDVASGESIEKLAREARYRVLAPHVNAQTLL 116
           LSPNAD WA++CQ      G+   +E VQL +    S+E  AR+ARY+ + PH+N Q +L
Sbjct: 63  LSPNADNWAKHCQARAAIYGLPVTVERVQLILGPRVSVEAEARKARYQAILPHLNPQDIL 122

Query: 117 LLGQHADDQLETFLLALKRGSGPKGLAAMAAYAPFA---EGHLL--RPLLTVSRQHIEAY 171
           L   H DDQLET LLALKRG GPKGLAAM    P +   +G  L  RPLL +SR+ IE +
Sbjct: 123 LTAHHEDDQLETILLALKRGQGPKGLAAMGQIQPLSLADKGSCLQVRPLLDISREMIETF 182

Query: 172 AKQHKLTWVIDESNADIRYERNFLRHQVTPVLTERWPSIRQAVQRSAELCAEQEALLQEF 231
           A+  +L  + DESN D +Y+RNFLR ++ P L  RWPSI     RSA+LCAEQ+A+++  
Sbjct: 183 AQTRQLVHIEDESNQDDKYDRNFLRLEIIPRLKARWPSIATTASRSAQLCAEQQAIVETE 242

Query: 232 LAEAL-----KKAITAEGGLSIAVLAEGSEGMRRQLIRAWFAHHRLPMPSRQHTERIWCE 286
           ++E L     K  +T +  L ++ LA      +  L+R +       +PS    +++  +
Sbjct: 243 VSERLPKLLVKAPVTEQTVLKLSELAAQPIEWQGILLRGFIESQEFSLPSYVQLQQMLQQ 302

Query: 287 VALASEDANPKLKLNHIEVRRFQHCLYLVPPE----------KDLSGWRSALVPEQRLPL 336
           +  A EDA   +++N   +RRF   LYL   E          +DL      L+ +    +
Sbjct: 303 LIHAKEDAKVHIRINDCVLRRFAGMLYLDSGETLSTALHITARDLHQEILTLLTQASAMV 362

Query: 337 PQGLGHLQLTSKAGGNIKLPDDPSQLWVSFEPQGLEAC-PVGRVGSRKLKKLFQEYGVPS 395
              +    L +  G  ++LP     + + +   G   C P  R   R+LKKL+QE  VP 
Sbjct: 363 EDKIVPFALVT-TGPRLRLPKADEVVSLGYGLPGQFRCQPHFRDKGRELKKLWQECAVPP 421

Query: 396 WRRRQTPILMYQNRVVCVADLFVDRDWSGQDCEL 429
           W R +   L Y +++V    L+V++ +  Q  E+
Sbjct: 422 WLRAEVGFLFYNDKLVMAFGLWVEKAFCAQGDEI 455