Pairwise Alignments

Query, 440 a.a., tRNA(Ile)-lysidine synthetase from Vibrio cholerae E7946 ATCC 55056

Subject, 465 a.a., tRNA(Ile)-lysidine synthetase (RefSeq) from Shewanella sp. ANA-3

 Score =  245 bits (625), Expect = 2e-69
 Identities = 164/450 (36%), Positives = 239/450 (53%), Gaps = 30/450 (6%)

Query: 3   DLYLHFVQQLARYPFR---KILLALSGGVDSQVL---LALLARGRDEFGWDVTAVHVHHG 56
           +L  H  + LA  P +   K++LA SGGVDS+VL   L+  A+   EF + +  ++VHHG
Sbjct: 5   ELCAHIARFLASLPLQAGSKLVLAYSGGVDSEVLAYGLSEFAKHHPEFHYQL--IYVHHG 62

Query: 57  LSPNADQWAQYCQRCCREVGMACQIEYVQLDVASGESIEKLAREARYRVLAPHVNAQTLL 116
           LSPNAD WA++CQ      G+   +E VQL +    SIE  AR+ RY+ +  H+  Q +L
Sbjct: 63  LSPNADAWAEHCQTRAANYGLPITVERVQLTLGPRVSIEAEARKMRYQAILQHLKPQDVL 122

Query: 117 LLGQHADDQLETFLLALKRGSGPKGLAAMAAYAPFAEGH-----LLRPLLTVSRQHIEAY 171
           L   H DDQLET LLALKRG GPKGLAAM        G       +RPLL +SR+ IEA+
Sbjct: 123 LTAHHEDDQLETILLALKRGQGPKGLAAMGQIQMLPLGEKGACLQVRPLLDISREQIEAF 182

Query: 172 AKQHKLTWVIDESNADIRYERNFLRHQVTPVLTERWPSIRQAVQRSAELCAEQEALLQEF 231
           A+  +L  + DESN D +Y+RNFLR ++ P L  RWPSI     RSA+LCAEQ+A++   
Sbjct: 183 AQTRQLVHIEDESNQDDKYDRNFLRLEIIPRLKARWPSIATTASRSAQLCAEQQAVVDAE 242

Query: 232 LAEALKKAI-----TAEGGLSIAVLAEGSEGMRRQLIRAWFAHHRLPMPSRQHTERIWCE 286
           ++E L K +     T +  L +  LA  +   +  L+R +       +PS    ++I  +
Sbjct: 243 VSERLPKLLTEAHFTQQTVLKLDELATQTSEWQGLLLRGFIESQGFGLPSYVQLQQILQQ 302

Query: 287 VALASEDANPKLKLNHIEVRRFQHCLYL-------VPPE---KDLSGWRSALVPEQRLPL 336
           +  A EDA  +L++    +RRF   LYL         P    ++L     AL+ +    +
Sbjct: 303 LMGAKEDAKVQLQIGDCVLRRFAGMLYLDTVNTVSAAPRITTRELHQDILALLTQASTRV 362

Query: 337 PQGLGHLQLTSKAGGNIKLPDDPSQLWVSFEPQGLEAC-PVGRVGSRKLKKLFQEYGVPS 395
              +    L +  G  + LP     + + ++  G   C P  R   R+LKKL+QE  VP 
Sbjct: 363 EDKIAPFTLAT-TGPRLCLPKAGEVVSLRYQLPGQFRCQPHFRDKGRELKKLWQECAVPP 421

Query: 396 WRRRQTPILMYQNRVVCVADLFVDRDWSGQ 425
           W R +   L Y  R+V    L+V++ +  Q
Sbjct: 422 WLRAEVGFLFYNERLVMALGLWVEKAFCAQ 451