Pairwise Alignments

Query, 107 a.a., cytochrome C biogenesis protein CcsB from Vibrio cholerae E7946 ATCC 55056

Subject, 207 a.a., cytochrome c (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 81.3 bits (199), Expect = 6e-21
 Identities = 42/108 (38%), Positives = 68/108 (62%), Gaps = 5/108 (4%)

Query: 5   MNKMVIALALGGCAMSGAALA-GDVAAGQAKAAVCAACHGMDGIAVIPGYPNLKGQSEQY 63
           M K+ +AL++   A+S  A+A G+  AG+ K  VC+ACHGMDG ++I  YP L GQ   Y
Sbjct: 1   MKKLALALSVVVAAISSPAIAEGNAEAGKTKIIVCSACHGMDGNSMIDMYPKLAGQHATY 60

Query: 64  LISSVKAYKNKERTGG----LAAVMQAQAMMLSDEDIANLAAYYASLK 107
           L   +  +++  ++GG    +  +M   AM LSD+DI +++AY+++ K
Sbjct: 61  LQKQIHDFRSAAQSGGKDGRMDPIMSGMAMPLSDQDILDISAYFSTQK 108



 Score = 52.8 bits (125), Expect = 2e-12
 Identities = 33/83 (39%), Positives = 43/83 (51%), Gaps = 4/83 (4%)

Query: 26  GDVAAGQAKAAVCAACHGMDGI-AVIPGYPNLKGQSEQYLISSVKAYKNKERTGGLAAVM 84
           GDV+ G      C ACHG DG  A   G+P L GQ   Y+   +  +++  R   L  +M
Sbjct: 128 GDVSRG---ITACMACHGPDGKGAESAGFPALAGQHANYIKLQLTKFRDAGRHNDLNGMM 184

Query: 85  QAQAMMLSDEDIANLAAYYASLK 107
           Q  A  L+D DI  L+ Y ASLK
Sbjct: 185 QDVAKKLNDSDIDALSKYLASLK 207