Pairwise Alignments

Query, 107 a.a., cytochrome C biogenesis protein CcsB from Vibrio cholerae E7946 ATCC 55056

Subject, 208 a.a., cytochrome c family protein (RefSeq) from Shewanella sp. ANA-3

 Score = 49.7 bits (117), Expect = 2e-11
 Identities = 31/106 (29%), Positives = 52/106 (49%), Gaps = 9/106 (8%)

Query: 5   MNKMVIALALG-----GCAMSGAALAGDVAAGQAKAAVCAACHGMDGIAVIPGYPNLKGQ 59
           MN  +  LA G     GCA++  A+A       A   +C  CHG +G  + P  P L G 
Sbjct: 1   MNIKIRTLAKGIALIYGCALTSVAIANPTPVPPA-GQICVTCHGAEGEGIEPLGPRLAGL 59

Query: 60  SEQYLISSVKAYKNKERTGGLAAVMQAQAMMLSDEDIANLAAYYAS 105
           S++Y+ + ++ ++   R     A M   AM L  + I  +A+Y+++
Sbjct: 60  SKEYISTQLQHFQAGVRQN---ATMMPMAMTLQGDGIDQVASYFSA 102



 Score = 40.0 bits (92), Expect = 2e-08
 Identities = 26/85 (30%), Positives = 41/85 (48%), Gaps = 4/85 (4%)

Query: 23  ALAGDVAAGQAKAAVCAACHGMDGIAVIPGYPNLKGQSEQYLISSVKAYKNKERTGGLAA 82
           A  GD + G      C  CHG  G+     +P L GQ   Y+ + + A++   R G +  
Sbjct: 128 AYQGDWSRG---LPACVTCHGPSGLGG-GLFPRLAGQQASYIKTQLLAWQAGTRKGDVDG 183

Query: 83  VMQAQAMMLSDEDIANLAAYYASLK 107
           +M   A  L+  ++  LA Y+A+LK
Sbjct: 184 MMANVANKLTAAEVDALANYFANLK 208