Pairwise Alignments

Query, 114 a.a., nitrogen regulatory protein P-II from Vibrio cholerae E7946 ATCC 55056

Subject, 121 a.a., P-II family nitrogen regulator from Methanococcus maripaludis JJ

 Score = 70.5 bits (171), Expect = 7e-18
 Identities = 42/122 (34%), Positives = 66/122 (54%), Gaps = 11/122 (9%)

Query: 3   MKKIEAIIKPFKLDDVREALAEVGITGMTVSEVKGFGRQKG----------HTELYRGAE 52
           MK+I AII+P K+   +  L  +G   MT + V G G+QK           + EL     
Sbjct: 1   MKEIIAIIRPSKMAQTKTVLEGLGFPAMTANRVLGRGKQKAIVGELGFEVDNKELLNQPG 60

Query: 53  YMVDFLPKVKLEIVVTDDVADRCVDTIIETAQTGKIGDGKIFITNVERVVRIRTGEEDED 112
            M  ++PK  L ++V D+ A   V+ I++  ++G+ GDGKIF+  +E ++ +RT E  E 
Sbjct: 61  DM-RYIPKTMLTLIVPDEDASLVVEAIMKVNKSGQYGDGKIFVCPIEDIITVRTSERGEA 119

Query: 113 AI 114
           AI
Sbjct: 120 AI 121