Pairwise Alignments

Query, 532 a.a., lytic transglycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 374 a.a., Membrane-bound lytic murein transglycosylase D precursor (EC 3.2.1.-) from Pseudomonas fluorescens FW300-N2E2

 Score =  204 bits (518), Expect = 6e-57
 Identities = 121/326 (37%), Positives = 176/326 (53%), Gaps = 20/326 (6%)

Query: 8   VLALLLVGCQSPQPVDTTTSDDQAVNPPTQSATVKKKRKPQTTATLPAGETESVEEERVA 67
           V+  LL GCQ  +P    T  D   N P +S     +  P T   +  GE+         
Sbjct: 22  VMGTLLYGCQHLEP--QLTIGDPFANEPYRSQLRWLEPAP-TDTIIQIGES--------- 69

Query: 68  LTPQEQDDVWQRIAMQFKLGIPKD--PSVDAQREWFLKNPGHLQAIASRAEPFLYLITEK 125
            +PQ    +W R+   F L         +D QR W +  P  L         +L+ I  +
Sbjct: 70  -SPQSGGSLWTRMRQGFSLQAKTQGVARIDEQRRWLMDRPAFLTQTGRAGSRYLHFIVGE 128

Query: 126 VEQRGLPLELVLLPIVESSFDPFAYSHGSAAGLWQFISSTGKRYGLKQNFWYDGRRDVAA 185
           + +R +PLEL LLP +ES F+P A S   A GLWQFI +TG+RY L+Q   YD RRD+ +
Sbjct: 129 LNKRNMPLELALLPAIESGFNPNAQSPAQALGLWQFIPATGRRYQLQQRGDYDERRDIPS 188

Query: 186 ATDAALDYLTVLNQHFDGDWYHAIAAYNSGEGRVARAIKANKKAGKPIDFFSLDLPKETS 245
           +T AALDYL+ L+ +FDGDW  A+AAYN+GEGRV  AI  N+  G   ++++L LP ET 
Sbjct: 189 STRAALDYLSYLHDYFDGDWLLALAAYNAGEGRVRDAITRNRARGLATNYWNLSLPGETQ 248

Query: 246 GYVPKLIALADVIANQEKYGISIPAIENRPVLATVDPKEQLDLAIAARYAGLTVKELQSF 305
            YVP+L+AL+ ++     YG+S+  I ++P    V   + +DLA  A+ +G+  +EL+  
Sbjct: 249 NYVPRLLALSQLVNAPADYGVSLAPIADQPYFQMVALAQPVDLAHLAQLSGVHERELRML 308

Query: 306 NPAYNQWATAPNGPHQLLIPVEKVER 331
           NPA    A       +LL+P++   R
Sbjct: 309 NPAARGRARG-----RLLMPLDASRR 329