Pairwise Alignments

Query, 532 a.a., lytic transglycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 534 a.a., Peptidoglycan-binding LysM:SLT:MLTD_N from Pseudomonas syringae pv. syringae B728a

 Score =  327 bits (839), Expect = 5e-94
 Identities = 195/531 (36%), Positives = 297/531 (55%), Gaps = 43/531 (8%)

Query: 12  LLVGCQSPQPVDTTTSDDQAVNPPTQSATVKKKRKPQTTATLPAGETESVEEERVALTPQ 71
           LL GCQS      T S D A N    +     K+KP   +  PA            L P 
Sbjct: 28  LLAGCQS------TASVDPASNHRAPNLAAGIKQKPIFLSHKPA----------TPLAPP 71

Query: 72  EQDDVWQRIAMQFKL--GIPKDPSVDAQREWFLKNPGHLQAIASRAEPFLYLITEKVEQR 129
           +  DVW+R+   F+L  G  ++P +D QR WF  NP  L+    R   +++ I E++E+R
Sbjct: 72  Q--DVWERMRQGFQLQQGNDQNPRIDQQRLWFANNPSFLENAGERGSLYMHYIVERLEER 129

Query: 130 GLPLELVLLPIVESSFDPFAYSHGSAAGLWQFISSTGKRYGLKQNFWYDGRRDVAAATDA 189
            +PLEL LLP++ES+++P A S   A GLWQFI STG+ + L+Q  +YDGRRD+ A+T A
Sbjct: 130 NMPLELALLPVIESAYNPMAVSRSQAVGLWQFIPSTGRYFNLRQTSFYDGRRDIQASTVA 189

Query: 190 ALDYLTVLNQHFDGDWYHAIAAYNSGEGRVARAIKANKKAGKPIDFFSLDLPKETSGYVP 249
           ALDYLT L+  F+GDW  A+AAYN+GEG V+RAI+ N K   P D+++L LP+ET  YVP
Sbjct: 190 ALDYLTRLHDMFNGDWLLALAAYNAGEGTVSRAIERNDKLNLPTDYWNLPLPQETRDYVP 249

Query: 250 KLIALADVIANQEKYGISIPAIENRPVLATVDPKEQLDLAIAARYAGLTVKELQSFNPAY 309
           KL+AL+ V+ + E YG+++  I N+P    V+  +++DL+  A  A +   EL   NPAY
Sbjct: 250 KLLALSQVVLSPEAYGVNLNPIANQPYFEVVELNKRVDLSKVASAADIDEDELIQLNPAY 309

Query: 310 NQWATAPNGPHQLLIPVEKVERFNLAMEENRGKGIKVVR-YKVKSGDTLSTIADKYNTTA 368
            +  T  +GP  LL+P  K +    ++   + + +   + Y+V+ GDTL ++A +Y  T 
Sbjct: 310 KKRLTV-DGPQHLLVPTSKAQLLTASLLTMKQEELVAWQPYRVRKGDTLESLASRYQVTV 368

Query: 369 KVIKEANQIASNQIRVGSYLFVPTSVKDEKAYALSVSNRLAKTQSVPRGQYQLTHTVNSG 428
             +K  N+++ N+++VG  L +P  VK     +  V   LA      R +   ++ V SG
Sbjct: 369 SSLKGNNKLSGNRLKVGQSLSIP--VKPGMQNSQPVFEALASNDKPSRTR---SYKVRSG 423

Query: 429 ESLWTIAKQYNVPYQSLAKWNGMAPKDALRKGQKLVIWKDSKPT--------------SG 474
           ++L  IA+   V  + L +WN +  K  L+ GQ LV+   SKP                G
Sbjct: 424 DNLTNIAQANKVDVEDLQRWNKLTGK-KLKVGQTLVMQDTSKPAGKAASKAVASTSAKDG 482

Query: 475 VIRTVTYKVRSGDTLSGIANKFKVKTADIVKWNDLNSTQYLKAGQQLKLYV 525
             +++ YK++ GD++  +A +F V+   + +WN   S Q LK GQ L +Y+
Sbjct: 483 EKKSMQYKIQKGDSMYLVAKRFNVEMQHLKRWNP-RSGQALKPGQTLTVYL 532