Pairwise Alignments

Query, 532 a.a., lytic transglycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 605 a.a., LysM repeat-containing protein from Dechlorosoma suillum PS

 Score =  283 bits (724), Expect = 1e-80
 Identities = 176/554 (31%), Positives = 286/554 (51%), Gaps = 65/554 (11%)

Query: 30  QAVNPPTQSATVKKKRKP-QTTATLPAGETESVEE-ERVALTPQEQDDVWQRIAMQFKLG 87
           Q++ P     + + +  P Q   +LP  E   + +  R        D++W+RI   F + 
Sbjct: 51  QSMVPSRTELSARPEASPVQNDGSLPVEEIAPIPQLPRTIDLTASPDNLWERIRNGFGMP 110

Query: 88  IPKDPSVDAQREWFLKNPGHLQAIASRAEPFLYLITEKVEQRGLPLELVLLPIVESSFDP 147
              +  V   ++W++  P +++ +  R+  +++ I E +E+RG+P+EL LLP+VES+++P
Sbjct: 111 NLNNDLVLTHQQWYMNRPDYVRRMVERSRRYMFHIVEAIEKRGMPMELALLPMVESAYNP 170

Query: 148 FAYSHGSAAGLWQFISSTGKRYGLKQNFWYDGRRDVAAATDAALDYL-TVLNQHFDGDWY 206
            AYS   A+GLWQFI STGK + L+QN+W D RRD+ A+T AALDYL T+   H  GDW 
Sbjct: 171 MAYSRSHASGLWQFIPSTGKNFKLEQNWWVDDRRDIIASTSAALDYLQTIYEMH--GDWQ 228

Query: 207 HAIAAYNSGEGRVARAIKANKKAGKPIDFFSLDLPKETSGYVPKLIALADVIANQEKYG- 265
            A+A+YN GEG V RAI  N+  G P D+ +L +P ET  YVPKL AL ++++N      
Sbjct: 229 LALASYNWGEGAVGRAIAKNRAKGLPTDYENLTMPAETRNYVPKLQALKNILSNPRLLAQ 288

Query: 266 ISIPAIENRPVLATVDPKEQLDLAIAARYAGLTVKELQSFNPAYNQWATAPNGPHQLLIP 325
           + +P I N+P  A V     +D+ +AA+ A + V E  + NPA+N+     + P  L++P
Sbjct: 289 LDLPQIPNQPYFAAVAKPADMDVKVAAKLAEMPVDEFVALNPAHNRPVIKADRP--LVLP 346

Query: 326 VEKVERFNLAMEENRGKGIKVVRYKVKSGDTLSTIADKYNTTAKVIKEANQIASN-QIRV 384
            EKVERF   +E N         Y +K+G+ L  +A +   +   +K  N +    ++  
Sbjct: 347 AEKVERFRANLENNEAPLSSWTSYTLKAGEKLDKVAARLGVSVAHLKTVNGLPPKAKVGA 406

Query: 385 GSYL----------------FVPTSVKDEKAYALSVSNRLAKTQSVPRGQYQLTHTVNSG 428
           G+ L                F P + +   A + + ++  A +++ PR Q    H V  G
Sbjct: 407 GTTLLVPARDGIEGDLAVASFTPPAAETAPARSDARADSRADSRNEPRAQPAKFHVVKKG 466

Query: 429 ESLWTIAKQYNVPYQSLAKWNGM-----------------APKDALR------------- 458
           ++L++IA++Y+V    L +WN +                 AP  A +             
Sbjct: 467 DTLFSIARRYDVSVDELKRWNKLGRNMAAGTKLTVAPAVAAPAAAAKTTVASAPANGRVS 526

Query: 459 ---KGQKLVIWK------DSKPTSGVIRTVTYKVRSGDTLSGIANKFKVKTADIVKWNDL 509
              +G+ L + K      ++K  +   +   Y +R GDTL+GIA KFKV+  DI +WN +
Sbjct: 527 ATLEGKNLKLSKNDKAPANAKAAAAKAKVARYTIRKGDTLAGIAKKFKVEADDIKRWNKV 586

Query: 510 NSTQYLKAGQQLKL 523
            +   LK GQ + +
Sbjct: 587 -APGNLKPGQTITI 599



 Score = 39.3 bits (90), Expect = 4e-07
 Identities = 18/52 (34%), Positives = 29/52 (55%)

Query: 345 KVVRYKVKSGDTLSTIADKYNTTAKVIKEANQIASNQIRVGSYLFVPTSVKD 396
           KV RY ++ GDTL+ IA K+   A  IK  N++A   ++ G  + +  +  D
Sbjct: 554 KVARYTIRKGDTLAGIAKKFKVEADDIKRWNKVAPGNLKPGQTITIQLAQND 605