Pairwise Alignments

Query, 532 a.a., lytic transglycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 587 a.a., transglycosylase, SLT family (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  204 bits (518), Expect = 1e-56
 Identities = 165/589 (28%), Positives = 263/589 (44%), Gaps = 108/589 (18%)

Query: 9   LALLLVGCQSPQPVDTTTSDDQAVNPPTQSAT-----VKKKRKPQTTATLPAGETE---- 59
           L++ + GC + +P+ +  +D +   P  + ++     V +   P     LP    E    
Sbjct: 26  LSISVSGCATRKPLSSLPADKETACPAPEKSSGSSDEVVELAIPPVDDGLPLSPAEQAAL 85

Query: 60  -SVEEERVALTPQEQDDVWQRIAMQFKLGIPKDPSVDAQREWFLKNPGHLQAIASRAEPF 118
            S  E    L+P++    ++ + + FK              +  +  G ++ +A R++ +
Sbjct: 86  ASTGEVDRNLSPED----YRAVVLHFKY-------------YTHRARGTMERLARRSQNY 128

Query: 119 LYLITEKVEQRGLPLELVLLPIVESSFDPFAYSHGSAAGLWQFISSTGKRYGLKQNFWYD 178
           L  + E + +RGLP EL  L IVES ++P A S   A G+WQF+  TGK YGL  ++W D
Sbjct: 129 LPYVREVLRKRGLPEELAYLAIVESGYNPNAVSSSGAVGIWQFMPYTGKLYGLDYDWWID 188

Query: 179 GRRDVAAATDAALDYLTVLNQHFDGDWYHAIAAYNSGEGRVARAIKANKKAGKPIDFF-- 236
            RRD   AT +A  YL  L   F+ DW+ A+AAYN+GEG++ RA+      G    FF  
Sbjct: 189 ERRDPYKATHSAASYLAKLYGDFN-DWHLALAAYNAGEGKIGRALAGTGAKG----FFEL 243

Query: 237 -----SLD----LPKETSGYVPKLIALADVIANQEKYGIS--IPAIENRPVLATVDPKEQ 285
                SLD    L  ET  YVP+ IA+  ++ N +  G +    +   RPV   V P   
Sbjct: 244 VRRNESLDEKARLKDETKQYVPRFIAITKIMRNLQSLGFAPLDTSCAIRPVEVRVRP--G 301

Query: 286 LDLAIAARYAGLTVKELQSFNPAYNQWATAPNGPHQLLIPVEKVERFNLAMEENRGKGIK 345
            DL   A+ +G++       NPA+ ++ + P+    + +P  + E     + + + +   
Sbjct: 302 TDLMALAQASGMSWASFSDLNPAFRRYVSPPDAHSVIYLPEARREAALAYLAKPQTRNYA 361

Query: 346 VVR-YKVKSGDTLSTIADKYNTTAKVIKEANQIASNQIRVGSYLFVPTSVKDEKAYALSV 404
             + Y V+ GDTL  +  +      V+K+ N++ SN ++VGS L +P     E     ++
Sbjct: 362 GWQPYTVRKGDTLERVGKRAGVPVSVLKQVNKVRSNNLKVGSTLLIPGGTHHEPDTGPAI 421

Query: 405 SNRLAKTQSVPRGQYQLTHTVNSGESLWTIAKQYNVPYQSLAKWNGMAPKDALRKGQKLV 464
              LA+     RG Y     V  G++L++IA+   V   +L + NGMA    LR GQKL 
Sbjct: 422 KRALAER----RGSY----IVKQGDTLYSIARTQGVELNTLMQANGMAEAHTLRVGQKLY 473

Query: 465 I--------------WKDSKPTSGVIR--------------------------------- 477
           I               K  KP + V R                                 
Sbjct: 474 IPGGSEAPAPQPVATSKPEKPQAPVARATSTPEPRQLVASVTAMPVSAAKAPSRSAGPSA 533

Query: 478 -----TVTYKVRSGDTLSGIANKFKVKTADIVKWNDLNSTQYLKAGQQL 521
                TVTYKV+ GDT+  IA KF V   ++++ N L     L+ G  +
Sbjct: 534 AVKTKTVTYKVQQGDTMWAIARKFNVHPKELMRQNRLEMDTVLRPGDSI 582