Pairwise Alignments

Query, 532 a.a., lytic transglycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 333 a.a., putative membrane-bound lytic murein transglycosylase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score = 93.2 bits (230), Expect = 1e-23
 Identities = 61/203 (30%), Positives = 103/203 (50%), Gaps = 14/203 (6%)

Query: 111 IASRAEPFLYLITEKVEQRGLPLELVLLPIVESSFDPFAYSHGSAAGLWQFISSTGKRYG 170
           +  RA  +  +I   ++  G+P +   L ++ES+ +  A S   AAGLWQF+ +TG+ +G
Sbjct: 97  LIKRANRYFPIIEPILKANGIPDDFKYLMVIESNLNNIARSPAGAAGLWQFMPATGREFG 156

Query: 171 LKQNFWYDGRRDVAAATDAALDYLTVLNQHFDGDWYHAIAAYNSGEGRVARAIKANKKAG 230
           L+ N   D R  +  AT AA  Y       + GDW    AAYN+G+GR++  +   + A 
Sbjct: 157 LEVNENVDERYHIEKATVAACKYFKQAYAKY-GDWMAVSAAYNAGQGRISSQLD-QQLAS 214

Query: 231 KPIDFFSLDLPKETSGYVPKLIALADVIANQEKYGISI------PAIENRPVLATVDPKE 284
             +D +   L +ETS Y+ +L+A+ ++  N ++YG  +      P I  + +  T     
Sbjct: 215 HAMDLW---LVEETSRYMFRLLAVKEIFKNPQRYGFLLKKEHLYPPIPYKEITVTTPIAN 271

Query: 285 QLDLAIAARYAGLTVKELQSFNP 307
             D    A+  G+T  +L+  NP
Sbjct: 272 LSDF---AKQQGITYAQLRDANP 291