Pairwise Alignments

Query, 532 a.a., lytic transglycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 515 a.a., MltD domain-containing protein (RefSeq) from Shewanella sp. ANA-3

 Score =  440 bits (1132), Expect = e-128
 Identities = 228/523 (43%), Positives = 328/523 (62%), Gaps = 23/523 (4%)

Query: 12  LLVGCQSPQPVDTTTSDDQAVNPPTQSATVKKKRKPQTTATLPAGETESVEEERVALTPQ 71
           LL GCQ       T  + Q   P  ++ T +        AT P         E   +T  
Sbjct: 14  LLTGCQ-------TLDNHQVTKPEAETVTTENTVPQYYLATEP---------ESAQIT-- 55

Query: 72  EQDDVWQRIAMQFKLGIPKDPSVDAQREWFLKNPGHLQAIASRAEPFLYLITEKVEQRGL 131
              DVW+RI    +L +P    V+  R+W++KNP HL+ I+ RA P++YLI E++E+R L
Sbjct: 56  ---DVWERIRQGMQLPVPDKKLVNYYRDWYIKNPKHLEVISERAAPYMYLIVEELEKRHL 112

Query: 132 PLELVLLPIVESSFDPFAYSHGSAAGLWQFISSTGKRYGLKQNFWYDGRRDVAAATDAAL 191
           P+E+ LLPI+ES+FDP A S  +A+GLWQF +     +GL+ N+WYDGRRDV A+T AAL
Sbjct: 113 PIEIALLPIIESAFDPSASSASAASGLWQFTTPMASHFGLEMNWWYDGRRDVPASTVAAL 172

Query: 192 DYLTVLNQHFDGDWYHAIAAYNSGEGRVARAIKANKKAGKPIDFFSLDLPKETSGYVPKL 251
           D L  L    + +W +AIAAYNSGE RV  AIK N+  G   DF+SLDLPKET  YVP+L
Sbjct: 173 DMLEYLYDKTNNNWLYAIAAYNSGESRVLNAIKRNEDKGLKTDFWSLDLPKETERYVPQL 232

Query: 252 IALADVIANQEKYGISIPAIENRPVLATVDPKEQLDLAIAARYAGLTVKELQSFNPAYNQ 311
           +ALA+VI + ++YGI++  I+N P +  VD   Q+DLA+AA  A +T  EL   NP YN+
Sbjct: 233 LALAEVIKHADEYGITLAPIDNSPSIEVVDIDSQIDLAMAAGLANMTTHELLKLNPGYNR 292

Query: 312 WATAPNGPHQLLIPVEKVERFNLAMEENRGKG-IKVVRYKVKSGDTLSTIADKYNTTAKV 370
           WATAP GPH L++P++K E F  A+ E   +  +  +RY +KSGD++  IA K++TT   
Sbjct: 293 WATAPTGPHTLVLPIDKSEEFKKALAETESEARVSWLRYTIKSGDSIGAIAKKHHTTVNA 352

Query: 371 IKEANQIASNQIRVGSYLFVPTSVKDEKAYALSVSNRLAKTQSVPRGQYQLTHTVNSGES 430
           I+ AN + +N I  G +L +P S  D++ YA+S S +L K  +      +LT+ V SG++
Sbjct: 353 IRAANGMKNNNIVAGRHLIIPVSADDKQLYAMSTSQKLPKKAATSTSGNKLTYQVKSGDT 412

Query: 431 LWTIAKQYNVPYQSLAKWNGMAPKDALRKGQKL-VIWKDSKPTSGVIRTVTYKVRSGDTL 489
           LW IA+ + V  + L  WN +     L+ GQKL ++   ++  +  IRTV+YKV+SGD+L
Sbjct: 413 LWQIAQNHKVSVKQLTAWNHLNKDSKLQMGQKLTIVAPPTQAEAEQIRTVSYKVKSGDSL 472

Query: 490 SGIANKFKVKTADIVKWNDLNSTQYLKAGQQLKLYVDVTKFSA 532
           + IA+KFKV  A++++WN L S+QY++ GQ LKL VD +  +A
Sbjct: 473 ARIASKFKVTVAELLEWNSLTSSQYIQPGQVLKLVVDESNLNA 515