Pairwise Alignments

Query, 245 a.a., class I SAM-dependent methyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 240 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4

 Score =  154 bits (390), Expect = 1e-42
 Identities = 87/220 (39%), Positives = 125/220 (56%), Gaps = 9/220 (4%)

Query: 13  PHSWAQLKNGQWVSESIQTRLDEWCPKLFGYHMLKLGGLSCELASCTCNIQHQVHLDIEN 72
           P +W +L NG W+ E+I+ +L  W PK+FGYHML +G LS  L      I  +  L  E+
Sbjct: 8   PQAWQELPNGLWLQEAIEDKLMPWWPKVFGYHMLCMGPLSHALEKPNLPIGREFSL-CES 66

Query: 73  PLHTVIADKYELPFLEKSIDVAILAHQLDYSNDPHRLLREVDRVLIDDGYLIITGFNPIS 132
            L  +  +  +LP     ID  + +  LD+  +P+ +LRE DRVLI  GYL I GFNP+S
Sbjct: 67  ALCCLQGEYSQLPIQNGVIDAVVCSMLLDFEANPYSVLRETDRVLISGGYLFIIGFNPLS 126

Query: 133 FIGLASLMPWRKNNLPWSGRMFTPNRIKDWLSVLNYQVVACDQYALFP-MQKYRPFWTW- 190
                 ++P R+  LPWSGR FTP R+KDWL +L YQVV  ++      + + R    W 
Sbjct: 127 PAFFGKMLPSRQEKLPWSGRFFTPARVKDWLGLLGYQVVGDERLVYHHLLSEIRGDSIWQ 186

Query: 191 --LENGLGGSNSPFGSLYFIVARKRTCPLKPIRSKWRLKR 228
             L+  L GS    GS+Y +VARK   P+ PI  + ++++
Sbjct: 187 HALQAWLPGS----GSVYILVARKLDSPMTPILDRQKVRQ 222