Pairwise Alignments

Query, 156 a.a., ribonuclease HI from Vibrio cholerae E7946 ATCC 55056

Subject, 166 a.a., Ribonuclease H (NCBI) from Rhodospirillum rubrum S1H

 Score =  178 bits (451), Expect = 4e-50
 Identities = 78/149 (52%), Positives = 101/149 (67%)

Query: 4   QVEIFTDGSCLGNPGPGGYGIVMRYKQVEKTLARGYRLTTNNRMEMLAAVMALQALKEPC 63
           +V++FTDG+C GNPGPGG+G ++R+   EK L  G   TTNNRME++A +  L+AL+ P 
Sbjct: 13  RVDMFTDGACSGNPGPGGWGTILRWGDTEKELWGGETPTTNNRMELMAVIRGLEALRRPV 72

Query: 64  RVILTTDSQYVRQGITQWIHNWKLRGWKTADKKPVKNADLWQALDKETARHQVEWRWVKG 123
            V + TDS+YV  GIT WIH WK  GWKTA KKPVKN DLW+ LD     H + W+WV+G
Sbjct: 73  TVTIHTDSRYVHDGITGWIHGWKRNGWKTAAKKPVKNEDLWRRLDAALGTHDISWQWVRG 132

Query: 124 HAGHRENEMCDELARQAAENPTEDDIGYQ 152
           H+GH ENE  DELAR+      +  +  Q
Sbjct: 133 HSGHVENERADELARRGTSEARQGKVDGQ 161