Pairwise Alignments

Query, 247 a.a., DNA polymerase III subunit epsilon from Vibrio cholerae E7946 ATCC 55056

Subject, 259 a.a., DNA polymerase III, epsilon subunit from Pseudomonas syringae pv. syringae B728a

 Score =  242 bits (617), Expect = 6e-69
 Identities = 129/237 (54%), Positives = 165/237 (69%), Gaps = 12/237 (5%)

Query: 11  RIVVLDTETTGMNREGGPHYEGHRIIEIGAVEIINRKLTGRHFHVYLKPDRDIQLEAIEV 70
           R +VLDTETTGM     P  +GHRIIEIG VE+I R+LTGRHFHVYL+PDR+    AI V
Sbjct: 9   RSIVLDTETTGM-----PVTDGHRIIEIGCVELIGRRLTGRHFHVYLQPDRESDEGAIGV 63

Query: 71  HGITDEFLKDKPEYKDVHEEFVDFIKGAELVAHNAPFDVGFMDYEFAKLGGA-IGKTSDF 129
           HGIT+EFL  KP + +V +EF +FIKGA+L+ HNA FDVGF++ EFA +G       +  
Sbjct: 64  HGITNEFLVGKPRFAEVADEFFEFIKGAQLIIHNAAFDVGFINNEFALMGSQDRADITQH 123

Query: 130 CKVTDTLAMAKRIFPGKRNNLDILCERYGIDNSHRTLHGALLDAEILADVYLLMTGGQTS 189
           C + DTL MA+   PG+RN+LD LC+RYG+DNS R LHGALLD+EILADVYL MTGGQTS
Sbjct: 124 CSILDTLMMARERHPGQRNSLDALCKRYGVDNSGRELHGALLDSEILADVYLAMTGGQTS 183

Query: 190 LQF---SSVTQNSGELS---AESLKRARSERKALKVLAASADELQAHQDRLDIVAKS 240
           L     +S    SGE S      ++R  ++RK  +++ AS  EL  H+ R+  +AK+
Sbjct: 184 LSLAGNASDGNGSGEGSGNRGSEIRRLPADRKPCRIIRASESELAEHEVRMSTIAKA 240