Pairwise Alignments

Query, 247 a.a., DNA polymerase III subunit epsilon from Vibrio cholerae E7946 ATCC 55056

Subject, 228 a.a., DNA polymerase III epsilon subunit-related 3'-5' exonuclease-like protein (RefSeq) from Shewanella amazonensis SB2B

 Score = 41.6 bits (96), Expect = 1e-08
 Identities = 51/191 (26%), Positives = 84/191 (43%), Gaps = 19/191 (9%)

Query: 7   AEYQRIVVLDTETTGMNREGGPHYEGHRIIEIGAVEIINRKLTGRHFHVYLKPDRDIQLE 66
           AE   ++ LD E TG++    P  +  +I+ IG V I    +  +     L   +    +
Sbjct: 38  AESAPMLALDLEMTGLD----PGRD--QILAIGVVPIDGGIIQLQGAESVLVEIQGSVGQ 91

Query: 67  AIEVHGITDEFLKDKPEYKDVHEEFVDFIKGAELVAHNAPFDVGFMDYEFAKLGGAIGKT 126
           +  +HGITD  L +     D     +  + G  LVAH+AP D+ F+    A +  ++G +
Sbjct: 92  SAVIHGITDRELHNALPLADAMNWLMQKMNGRILVAHHAPLDLAFIR---ANMSRSLGIS 148

Query: 127 SDFCKVTDTLAMAK----RIFPGKRN---NLDILCERYGID--NSHRTLHGALLDAEILA 177
                + DTLA+ +    RI    +     L    +RYG+   ++H  L  AL  AE+L 
Sbjct: 149 MPMLAI-DTLALERQRLLRIHDAIQEGSLRLGASRQRYGLPVYDAHNALTDALSCAELLL 207

Query: 178 DVYLLMTGGQT 188
                + G  T
Sbjct: 208 AQLAAIGGAHT 218