Pairwise Alignments

Query, 247 a.a., DNA polymerase III subunit epsilon from Vibrio cholerae E7946 ATCC 55056

Subject, 230 a.a., DNA polymerase III, epsilon subunit (NCBI) from Rhodospirillum rubrum S1H

 Score =  159 bits (401), Expect = 6e-44
 Identities = 96/237 (40%), Positives = 141/237 (59%), Gaps = 17/237 (7%)

Query: 11  RIVVLDTETTGMNREGGPHYEGHRIIEIGAVEIINRKLTGRHFHVYLKPDRDIQLEAIEV 70
           R +VLDTETTG++        G R++EIG +E+IN   +G   H+Y+ P+RD+  EA  V
Sbjct: 2   REIVLDTETTGLDPA-----TGDRLVEIGCIELINHMPSGNDLHLYVNPERDMPPEAFRV 56

Query: 71  HGITDEFLKDKPEYKDVHEEFVDFIKGAELVAHNAPFDVGFMDYEFAKLGGAIGKTSDFC 130
           HG+++ FL DKP + +V +EF+ FI    L+ HNA FD+ F++ E A+L           
Sbjct: 57  HGLSEAFLADKPLFAEVVDEFLAFIGEDRLIIHNAAFDMKFLNAELARLK---RPPLPMS 113

Query: 131 KVTDTLAMAKRIFPGKRNNLDILCERYGIDNSHRTLHGALLDAEILADVYLLMTGG-QTS 189
           +  DTL MA+  FPG + +LD LC R+G+D S RT HGAL+D  +LA+VYL + GG +  
Sbjct: 114 RALDTLRMAQARFPGAQASLDALCRRFGVDTSSRTKHGALIDCVLLAEVYLELIGGREPG 173

Query: 190 LQFSSVTQNSGELSAESLKRARSERKALKVLAASADELQAHQDRLDIVAKSGTCLWR 246
           L  S+  +  G     +++ AR  R A +  AAS +EL AH++ L  V      +WR
Sbjct: 174 LALSADKRRDG----AAVQVARPFR-APRPHAASPEELAAHEEFLKKVKDP---IWR 222