Pairwise Alignments

Query, 247 a.a., DNA polymerase III subunit epsilon from Vibrio cholerae E7946 ATCC 55056

Subject, 204 a.a., DNA polymerase III, epsilon subunit (RefSeq) from Shewanella loihica PV-4

 Score = 82.8 bits (203), Expect = 5e-21
 Identities = 62/174 (35%), Positives = 91/174 (52%), Gaps = 13/174 (7%)

Query: 12  IVVLDTETTGMNREGGPHYEGHRIIEIGAVEIINRKLTGRHFHVYLKPDRDIQLEAIEVH 71
           IVVLD ETTG++       +G R IEIGAV++    +  R F   + P   +     +  
Sbjct: 6   IVVLDFETTGLSP-----LQGDRAIEIGAVKLQQGVVVDR-FQQLMNPGFAVSSFIADYT 59

Query: 72  GITDEFLKDKPEYKDVHEEFVDFIKGAELVAHNAPFDVGFMDYEFAKLGGAIGKTSDFCK 131
           GIT+  L D P  + V  +F DFI+G  LVAHNA FD  F+  EFA++   + ++  F  
Sbjct: 60  GITNAMLSDAPSCETVMADFADFIQGCHLVAHNASFDQKFLTAEFARID--LEQSQPF-- 115

Query: 132 VTDTLAMAKRIFPGKRNN-LDILCERYGIDNSHRTLHGALLDAEILADVYLLMT 184
              +L +A+R+F    N+ L  L    GI N     H AL DAE+   ++L ++
Sbjct: 116 -ACSLLLARRLFQAVPNHQLGTLVNYLGIAND-GVFHRALNDAEVTGALWLALS 167